RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 SSTR2P30874 369 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 NTSP30990 170 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 CEACAM8P31997 349 aaPredicted RBP5.33□□□□□ -1.56
CDHR3-213ENST00000488386 GABRA3P34903 492 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 EVI2BP34910 448 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 MPIP34949 423 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 KRT20P35900 424 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 SUCLG1P53597 346 aaKnown RBP5.33□□□□□ -1.56
CDHR3-213ENST00000488386 CASP9P55211 416 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 DCAF7P61962 342 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 RPP38P78345 283 aaKnown RBP5.33□□□□□ -1.56
CDHR3-213ENST00000488386 PTGR1Q14914 329 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 GRAMD1BQ3KR37 738 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 C3orf36Q3SXR2 165 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 UGT3A2Q3SY77 523 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 CCNJQ5T5M9 372 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 RIPPLY2Q5TAB7 128 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 APOOLQ6UXV4 268 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 DOK3Q7L591 496 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 OLIG3Q7RTU3 272 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 LUZP2Q86TE4 346 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 IFNEQ86WN2 208 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 CLEC4FQ8N1N0 589 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 KRTCAP2Q8N6L1 136 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 OR7A2PQ8NGA2 310 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 OR4K17Q8NGC6 315 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 STON2Q8WXE9 905 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 SMPDL3BQ92485 455 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 SLC9A6Q92581 669 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 INTS12Q96CB8 462 aaKnown RBP5.33□□□□□ -1.56
CDHR3-213ENST00000488386 PPCDCQ96CD2 204 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 TMCO6Q96DC7 493 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 ARSGQ96EG1 525 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 RMND5BQ96G75 393 aaPredicted RBP5.33□□□□□ -1.56
CDHR3-213ENST00000488386 SLC35A4Q96G79 324 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 SFXN2Q96NB2 322 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 SECISBP2Q96T21 854 aaKnown RBP5.33□□□□□ -1.56
CDHR3-213ENST00000488386 SH3GL2Q99962 352 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 TREX2Q9BQ50 279 aaPredicted RBP5.33□□□□□ -1.56
CDHR3-213ENST00000488386 ZNF559Q9BR84 538 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 GPATCH1Q9BRR8 931 aaKnown RBP5.33□□□□□ -1.56
CDHR3-213ENST00000488386 PARD6BQ9BYG5 372 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 OR2B2Q9GZK3 357 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 MCCC2Q9HCC0 563 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 C1orf109Q9NX04 203 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 QPCTLQ9NXS2 382 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 TAS2R10Q9NYW0 307 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 TAS2R9Q9NYW1 312 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 C19orf53Q9UNZ5 99 aaPredicted RBP5.33□□□□□ -1.56
CDHR3-213ENST00000488386 L3MBTL1Q9Y468 752 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 MED12LQ86YW9 2145 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 DCHS2Q6V1P9 2916 aa5.33□□□□□ -1.56
CDHR3-213ENST00000488386 CENPEQ02224 2701 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 ABCA12Q86UK0 2595 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 APCP25054 2843 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 CREBBPQ92793 2442 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 HSPB2A8KAH6 182 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 AHRRA9YTQ3 701 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 NPIPB8E9PQR5 432 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 PLOD2O00469 737 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 FADS1O60427 444 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 ZIC3O60481 467 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 COQ9O75208 318 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 CBR3O75828 277 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 BCAS2O75934 225 aaPredicted RBP5.32□□□□□ -1.56
CDHR3-213ENST00000488386 ZWINTO95229 277 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 UTS2O95399 124 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 PSMG1O95456 288 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 TGM6O95932 706 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 C1QCP02747 245 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 AMY1AP04745 511 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 BPGMP07738 259 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 NUDT17P0C025 328 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 TMIGD3P0DMS9 266 aaPredicted RBP5.32□□□□□ -1.56
CDHR3-213ENST00000488386 LAMP1P11279 417 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 BCKDHAP12694 445 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 TNFRSF1AP19438 455 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 PRPH2P23942 346 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 ELAVL4P26378 380 aaKnown RBP5.32□□□□□ -1.56
CDHR3-213ENST00000488386 DPP4P27487 766 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 SRD5A2P31213 254 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 LHX2P50458 406 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 DGKQP52824 942 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 PNLIPRP2P54317 469 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 CLDN15P56746 228 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 CLDN18P56856 261 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 B3GALT5-AS1P59052 145 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 SIRPAP78324 504 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 DGCR2P98153 550 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 ZNF844Q08AG5 666 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 HSPB2Q16082 182 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 PDCD2Q16342 344 aaPredicted RBP5.32□□□□□ -1.56
CDHR3-213ENST00000488386 DUSP5Q16690 384 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 KRT71Q3SY84 523 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 NRN1LQ496H8 165 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 NHSL2Q5HYW2 709 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 RAET1LQ5VY80 246 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 NSUN5P2Q63ZY6 315 aa5.32□□□□□ -1.56
CDHR3-213ENST00000488386 PPP4R4Q6NUP7 873 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms