RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 SELENOMQ8WWX9 145 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 MYDGFQ969H8 173 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 HPDLQ96IR7 371 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 TXN2Q99757 166 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 TBCDQ9BTW9 1192 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 C1orf21Q9H246 121 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 COG4Q9H9E3 785 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 CAB39LQ9H9S4 337 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 SH2D2AQ9NP31 389 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 MMP26Q9NRE1 261 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 AGPAT5Q9NUQ2 364 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 ATP6V1HQ9UI12 483 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 XPO7Q9UIA9 1087 aaKnown RBP1.45□□□□□ -2.18
SMC4-220ENST00000488017 EIF3LQ9Y262 564 aaKnown RBP1.45□□□□□ -2.18
SMC4-220ENST00000488017 WDR45Q9Y484 360 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 USP16Q9Y5T5 823 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 AP4B1Q9Y6B7 739 aa1.45□□□□□ -2.18
SMC4-220ENST00000488017 FBN3Q75N90 2809 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 LTBP1Q14766 1721 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 A0A0J9YXY3 114 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 TUBAL3A6NHL2 446 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 DLGAP1O14490 977 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 OR4F21O95013 312 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 AKR7A3O95154 331 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 IGHV4-34P06331 123 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 OR8U8P0C7N1 319 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 THRBP10828 461 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 BCKDHAP12694 445 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 GCFC2P16383 781 aaKnown RBP1.44□□□□□ -2.18
SMC4-220ENST00000488017 MAPK3P27361 379 aaPredicted RBP1.44□□□□□ -2.18
SMC4-220ENST00000488017 ADSSP30520 456 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 ADRA1AP35348 466 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 GCKP35557 465 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 NUDT1P36639 197 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 CTRLP40313 264 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 MAGEA5P43359 124 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 KIR2DS2P43631 304 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 ASMTP46597 345 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 BDKRB1P46663 353 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 MTTPP55157 894 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 GMFBP60983 142 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 HSF2Q03933 536 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 RGS1Q08116 209 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 SF3A2Q15428 464 aaKnown RBP1.44□□□□□ -2.18
SMC4-220ENST00000488017 SYPL1Q16563 259 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 PARP10Q53GL7 1025 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 LRRC70Q7Z2Q7 622 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 CBWD2Q8IUF1 395 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 MISPQ8IVT2 679 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 SKA3Q8IX90 412 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 GCNT2Q8N0V5 402 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 LINC01561Q8N1V8 128 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 CNNM3Q8NE01 707 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 NEIL3Q8TAT5 605 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 DNAJA4Q8WW22 397 aaPredicted RBP1.44□□□□□ -2.18
SMC4-220ENST00000488017 IL1F10Q8WWZ1 152 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 MBOAT4Q96T53 435 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 KCNK16Q96T55 309 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 NXF3Q9H4D5 531 aaKnown RBP1.44□□□□□ -2.18
SMC4-220ENST00000488017 DHX33Q9H6R0 707 aaKnown RBP1.44□□□□□ -2.18
SMC4-220ENST00000488017 FANCFQ9NPI8 374 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 PHF11Q9UIL8 331 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 HOOK1Q9UJC3 728 aaKnown RBP1.44□□□□□ -2.18
SMC4-220ENST00000488017 RIMS3Q9UJD0 308 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 ZNF223Q9UK11 482 aaPredicted RBP1.44□□□□□ -2.18
SMC4-220ENST00000488017 ODF2LQ9ULJ1 636 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 MGAT4BQ9UQ53 548 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 IFT52Q9Y366 437 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 THSD7BQ9C0I4 1608 aa1.44□□□□□ -2.18
SMC4-220ENST00000488017 ESYT2A0FGR8 921 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 FAM166BA8MTA8 275 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 H3BMQ9 156 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 CHADO15335 359 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 STX7O15400 261 aaKnown RBP1.43□□□□□ -2.18
SMC4-220ENST00000488017 SCGB2A1O75556 95 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 B3GAT3O94766 335 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 HBQ1P09105 142 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 H2AFXP16104 143 aaPredicted RBP1.43□□□□□ -2.18
SMC4-220ENST00000488017 IL10P22301 178 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 CYP2F1P24903 491 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 ATP5A1P25705 553 aaKnown RBP1.43□□□□□ -2.18
SMC4-220ENST00000488017 DPP4P27487 766 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 DLSTP36957 453 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 SUCLG1P53597 346 aaKnown RBP1.43□□□□□ -2.18
SMC4-220ENST00000488017 OSTNP61366 133 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 NTHL1P78549 312 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 NUCB2P80303 420 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 PTGES3Q15185 160 aaKnown RBP1.43□□□□□ -2.18
SMC4-220ENST00000488017 CDC37Q16543 378 aaPredicted RBP1.43□□□□□ -2.18
SMC4-220ENST00000488017 MAPK6Q16659 721 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 TIGITQ495A1 244 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 LINC01620Q4KN68 170 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 ATF7IP2Q5U623 682 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 PVRIGQ6DKI7 326 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 NIPAL3Q6P499 406 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 ARSKQ6UWY0 536 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 CATSPER4Q7RTX7 472 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 FAM71E2Q8N5Q1 922 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 RNF182Q8N6D2 247 aa1.43□□□□□ -2.18
SMC4-220ENST00000488017 C20orf203Q8NBC4 194 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms