RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 P0C879 139 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 HNRNPA2B1P22626 353 aaKnown RBP2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 OTX2P32243 289 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 CBX1P83916 185 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 ZNF45Q02386 682 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 KLHL30Q0D2K2 578 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 ELP6Q0PNE2 266 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 ST3GAL3Q11203 375 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 ARFRP1Q13795 201 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 DPYSL3Q14195 570 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 ELAVL3Q14576 367 aaKnown RBP2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 ARL6IP1Q15041 203 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 AANATQ16613 207 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 LRRC23Q53EV4 343 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 TRPM8Q7Z2W7 1104 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 ZNF589Q86UQ0 364 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 ZDHHC21Q8IVQ6 265 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 SKA3Q8IX90 412 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 BBS1Q8NFJ9 593 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 OR2A12Q8NGT7 310 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 MAIP1Q8WWC4 291 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 C4orf36Q96KX1 117 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 TESK2Q96S53 571 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 SLC6A7Q99884 636 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 RHOJQ9H4E5 214 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 PLGRKTQ9HBL7 147 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 PAK1IP1Q9NWT1 392 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 CD274Q9NZQ7 290 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 TBK1Q9UHD2 729 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 PRO0461Q9UI25 63 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 BTNL2Q9UIR0 455 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 ZNF256Q9Y2P7 627 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 IFT52Q9Y366 437 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 KIF25-AS1Q9Y6Z4 181 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 METP08581 1390 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 FRMPD4Q14CM0 1322 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 ADAMTS9Q9P2N4 1935 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 LOC100131303A0A0U1RQF7 123 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 MBLAC1A4D2B0 266 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 PCP4L1A6NKN8 68 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 PP2D1A8MPX8 630 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 K7ENP7 123 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 SULT2B1O00204 365 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 CPLX1O14810 134 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 ZSCAN12O43309 604 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 ECI2O75521 394 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 F10P00742 488 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 IGHV3-23P01764 117 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 IGF1P05019 195 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 CD80P33681 288 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 HPCAL1P37235 193 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 STX17P56962 302 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 EWSR1Q01844 656 aaKnown RBP eCLIP2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 GANABQ14697 944 aaKnown RBP2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 SLC5A12Q1EHB4 618 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 RNF212Q495C1 297 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 NADK2Q4G0N4 442 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 WSCD1Q658N2 575 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 CCDC137Q6PK04 289 aaKnown RBP2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 SCARA5Q6ZMJ2 495 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 ARMCX2Q7L311 632 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 GDPD3Q7L5L3 318 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 C11orf42Q8N5U0 333 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 OR2AP1Q8NGE2 309 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 LINC01006Q8NI28 216 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 RAB7BQ96AH8 199 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 C12orf66Q96MD2 445 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 ZIM3Q96PE6 472 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 IL4I1Q96RQ9 567 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 CITED1Q99966 193 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 TMEM117Q9H0C3 514 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 ZNF702PQ9H963 129 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 MARCH5Q9NX47 278 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 TMEM9Q9P0T7 183 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 WRAP73Q9P2S5 460 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 WARS2Q9UGM6 360 aaKnown RBP2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 ABCG2Q9UNQ0 655 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 CA5BQ9Y2D0 317 aa2.72□□□□□ -1.97
HMGB1P36-201ENST00000487709 IGHV2-70DA0A0C4DH43 119 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 G3V4G9 280 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 H0YCG3 227 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 OR1F1O43749 312 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 TM7SF2O76062 418 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 ACTL6AO96019 429 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 GIG44P09565 113 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 OR8U8P0C7N1 319 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 DBTP11182 482 aaKnown RBP2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 CCDC130P13994 396 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 TPSB2P20231 275 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 NT5EP21589 574 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 TDO2P48775 406 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 PPT1P50897 306 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 HNRNPA3P51991 378 aaKnown RBP2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 WNT4P56705 351 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 CCDC173Q0VFZ6 552 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 SNTB2Q13425 540 aaKnown RBP2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 RIPK1Q13546 671 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 TPSAB1Q15661 275 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms