RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 GMNCA6NCL1 334 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 EVPLLA8MZ36 301 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 EFNA2O43921 213 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 CCDC22O60826 627 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 ADAM11O75078 769 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 PGM3O95394 542 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 CLDN14O95500 239 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 POU3F2P20265 443 aaPredicted RBP11.86□□□□□ -0.51
SF1-216ENST00000486867 GZMMP51124 257 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 SUCLG1P53597 346 aaKnown RBP11.86□□□□□ -0.51
SF1-216ENST00000486867 CLDN20P56880 219 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 EEFSECP57772 596 aaKnown RBP11.86□□□□□ -0.51
SF1-216ENST00000486867 EEF1A1P68104 462 aaKnown RBP11.86□□□□□ -0.51
SF1-216ENST00000486867 FOXF1Q12946 379 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 CBFBQ13951 182 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 TOMM34Q15785 309 aaPredicted RBP11.86□□□□□ -0.51
SF1-216ENST00000486867 CTU2Q2VPK5 515 aaKnown RBP11.86□□□□□ -0.51
SF1-216ENST00000486867 GCNT6Q5T4J0 391 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 PTOV1Q86YD1 416 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 PEX5LQ8IYB4 626 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 BBS10Q8TAM1 723 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 WDR60Q8WVS4 1066 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 CNOT9Q92600 299 aaKnown RBP11.86□□□□□ -0.51
SF1-216ENST00000486867 WNT2BQ93097 391 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 SLC35B4Q969S0 331 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 RNF145Q96MT1 663 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 CCDC106Q9BWC9 280 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 RSPO3Q9BXY4 272 aaPredicted RBP11.86□□□□□ -0.51
SF1-216ENST00000486867 KAT8Q9H7Z6 458 aaKnown RBP11.86□□□□□ -0.51
SF1-216ENST00000486867 ACER3Q9NUN7 267 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 COQ3Q9NZJ6 369 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 STOML1Q9UBI4 398 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 ZNF175Q9Y473 711 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 CHST2Q9Y4C5 530 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 DCHS2Q6V1P9 2916 aa11.86□□□□□ -0.51
SF1-216ENST00000486867 TMEM247A6NEH6 219 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 CLDN24A6NM45 220 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 CLCA1A8K7I4 914 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 HSPB2A8KAH6 182 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 SHISA8B8ZZ34 492 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 H0Y3Z8 333 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 IL18BPO95998 194 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 UBTFL6P0CB48 400 aaPredicted RBP11.85□□□□□ -0.51
SF1-216ENST00000486867 PGCP20142 388 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 SLC6A8P48029 635 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 GYS2P54840 703 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 PCBP3P57721 371 aaKnown RBP11.85□□□□□ -0.51
SF1-216ENST00000486867 TFF3Q07654 80 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 RBBP4Q09028 425 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 NFYCQ13952 458 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 QPRTQ15274 297 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 HSPB2Q16082 182 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 MRPL2Q5T653 305 aaKnown RBP11.85□□□□□ -0.51
SF1-216ENST00000486867 REEP3Q6NUK4 255 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 PIGWQ7Z7B1 504 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 SNX32Q86XE0 403 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 ZNF440Q8IYI8 595 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 MEIOBQ8N635 442 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 NAXEQ8NCW5 288 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 TNIP2Q8NFZ5 429 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 OR8J3Q8NGG0 315 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 OR5M1Q8NGP8 315 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 MAL2Q969L2 176 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 SDCCAG3Q96C92 435 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 LRRC58Q96CX6 371 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 ELAC2Q9BQ52 826 aaKnown RBP11.85□□□□□ -0.51
SF1-216ENST00000486867 THUMPD3Q9BV44 507 aaKnown RBP11.85□□□□□ -0.51
SF1-216ENST00000486867 SPATA9Q9BWV2 254 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 NSRP1Q9H0G5 558 aaKnown RBP11.85□□□□□ -0.51
SF1-216ENST00000486867 ALKBH4Q9NXW9 302 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 ZNF629Q9UEG4 869 aaPredicted RBP11.85□□□□□ -0.51
SF1-216ENST00000486867 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.85□□□□□ -0.51
SF1-216ENST00000486867 IFT52Q9Y366 437 aa11.85□□□□□ -0.51
SF1-216ENST00000486867 H0YC42 278 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 H3BML4 177 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 MRASO14807 208 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 GMFGO60234 142 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 RCBTB2O95199 551 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 IL7RP16871 459 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 IL11P20809 199 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 TCEA1P23193 301 aaKnown RBP11.84□□□□□ -0.51
SF1-216ENST00000486867 ACAA2P42765 397 aaKnown RBP11.84□□□□□ -0.51
SF1-216ENST00000486867 RNF144AP50876 292 aaPredicted RBP11.84□□□□□ -0.51
SF1-216ENST00000486867 ZNF136P52737 540 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 TPD52P55327 224 aaPredicted RBP11.84□□□□□ -0.51
SF1-216ENST00000486867 SESN3P58005 492 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 GNGT1P63211 74 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 CDK6Q00534 326 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 SF3A3Q12874 501 aaKnown RBP eCLIP11.84□□□□□ -0.51
SF1-216ENST00000486867 SELENBP1Q13228 472 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 CYLC2Q14093 348 aaPredicted RBP11.84□□□□□ -0.51
SF1-216ENST00000486867 SELPLGQ14242 412 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 GUSBP1Q15486 140 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 FBXL19-AS1Q494R0 122 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 LIN52Q52LA3 116 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 RPS26P11Q5JNZ5 115 aaPredicted RBP11.84□□□□□ -0.51
SF1-216ENST00000486867 REP15Q6BDI9 236 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 NANOGP8Q6NSW7 305 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 ZNF836Q6ZNA1 936 aa11.84□□□□□ -0.51
SF1-216ENST00000486867 ESPNLQ6ZVH7 1005 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms