RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PRR23D2P0DMB1 279 aaPredicted RBP16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 ZC3H14Q6PJT7 736 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 ZNF517Q6ZMY9 492 aaPredicted RBP16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 TMEM91Q6ZNR0 172 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 SLC44A3Q8N4M1 653 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 ZNF614Q8N883 585 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 C19orf47Q8N9M1 422 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 SLC37A3Q8NCC5 494 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 ZDHHC1Q8WTX9 485 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 PTP4A1Q93096 173 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 TIMP4Q99727 224 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 ATF6BQ99941 703 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 INPP5EQ9NRR6 644 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 BABAM2Q9NXR7 383 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 COMMD3Q9UBI1 195 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 CYP8B1Q9UNU6 501 aa16.61■□□□□ 0.25
PDLIM7-207ENST00000486828 TRAV27A0A087WT01 109 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 A0A1B0GWA3 101 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 SHISA3A0PJX4 238 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 CCDC182A6NF36 153 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 CD8B2A6NJW9 211 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 RNF13O43567 381 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 CD8BP10966 210 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 RBM34P42696 430 aaKnown RBP16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 EMDP50402 254 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 GALEQ14376 348 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 INSL4Q14641 139 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 TAB1Q15750 504 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 KLHL12Q53G59 568 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 PYDC2Q56P42 97 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 ZNF544Q6NX49 715 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 MCATQ8IVS2 390 aaKnown RBP16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 ARSGQ96EG1 525 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 ZNF426Q9BUY5 554 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 RBCK1Q9BYM8 510 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 SLC22A4Q9H015 551 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 DNAJB12Q9NXW2 375 aaKnown RBP16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 BAIAP2Q9UQB8 552 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 SLC35A3Q9Y2D2 325 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 DAPL1A0PJW8 107 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 RGS9O75916 674 aaPredicted RBP16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 IGKV1D-16P01601 117 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 CFL1P23528 166 aaKnown RBP16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 HTR3AP46098 478 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 PRTGQ2VWP7 1150 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 RAB43Q86YS6 212 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 PTCHD1Q96NR3 888 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 TEAD3Q99594 435 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 SOSTQ9BQB4 213 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 TRIM2Q9C040 744 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 HOXD1Q9GZZ0 328 aa16.6■□□□□ 0.25
PDLIM7-207ENST00000486828 VCANP13611 3396 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 A0A0A6YYC8 382 aaPredicted RBP16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 RIIAD1A6NNX1 92 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 B4DGG1 531 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 I3L1I5 382 aaPredicted RBP16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 GTPBP1O00178 669 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 ADAM11O75078 769 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 CCNKO75909 580 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 NCR1O76036 304 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 RNH1P13489 461 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 ACAA2P42765 397 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 BLKP51451 505 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 ZNF362Q5T0B9 420 aaPredicted RBP16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 METAP1DQ6UB28 335 aaPredicted RBP16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 LSMEM1Q8N8F7 131 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 AVL9Q8NBF6 648 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 OR4N2Q8NGD1 307 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 OR51A7Q8NH64 312 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 OR4C6Q8NH72 309 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 RIT1Q92963 219 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 TBX5Q99593 518 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 TRIM36Q9NQ86 728 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 HCN3Q9P1Z3 774 aa16.59■□□□□ 0.25
PDLIM7-207ENST00000486828 C2orf92A0A1B0GVN3 265 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 LINC00854A0A1B0GVQ3 168 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 C2CD4DB7Z1M9 353 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 TGFBR3LH3BV60 316 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 HPGDSO60760 199 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 SLC2A5P22732 501 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 RPS7P62081 194 aaKnown RBP16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 MZT2AQ6P582 158 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 CNIH2Q6PI25 160 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 PARGQ86W56 976 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 GATAD2AQ86YP4 633 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 SLC43A2Q8N370 569 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 OR10H4Q8NGA5 316 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 SLC35B4Q969S0 331 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 VSTM2LQ96N03 204 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 RNF32Q9H0A6 362 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 KCNN2Q9H2S1 579 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 PPP1R3EQ9H7J1 279 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 POU2F3Q9UKI9 436 aa16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 SIRT4Q9Y6E7 314 aaPredicted RBP16.58■□□□□ 0.25
PDLIM7-207ENST00000486828 SLC9B1P1A6NJY1 282 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 CTNSO60931 367 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 REM1O75628 298 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 PPP1R3DO95685 299 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 NGFRP08138 427 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms