RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 ZNF517Q6ZMY9 492 aaPredicted RBP13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 SHISA6Q6ZSJ9 500 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 MBOAT2Q6ZWT7 520 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 ANKRD37Q7Z713 158 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 NKAIN4Q8IVV8 208 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 RNF113BQ8IZP6 322 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 LSM14AQ8ND56 463 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 C17orf47Q8NEP4 570 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 RHOXF1Q8NHV9 184 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 CNOT9Q92600 299 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 EXTL1Q92935 676 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 GAL3ST4Q96RP7 486 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 GPR87Q9BY21 358 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 TRIM2Q9C040 744 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 NXF5Q9H1B4 397 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 UBQLN4Q9NRR5 601 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 RASSF1Q9NS23 344 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 DNAJB12Q9NXW2 375 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 SLC35A3Q9Y2D2 325 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 NTNG1Q9Y2I2 539 aa13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 SMG1Q96Q15 3661 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-204ENST00000486319 SERINC4A6NH21 518 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 TO15178 435 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 MRPS14O60783 128 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 THY1P04216 161 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 HPGDP15428 266 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 POU1F1P28069 291 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 HTR2AP28223 471 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 FMO3P31513 532 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 KRT20P35900 424 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 ADH7P40394 386 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 GSSP48637 474 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 EMP2P54851 167 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 FOXB2Q5VYV0 432 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 SLX4IPQ5VYV7 408 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 FAAH2Q6GMR7 532 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 BORAQ6PGQ7 559 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 LANCL3Q6ZV70 420 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 PRICKLE2Q7Z3G6 844 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 C9orf40Q8IXQ3 194 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 ZNF440Q8IYI8 595 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 SLC39A7Q92504 469 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 HSPBAP1Q96EW2 488 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 WBP1Q96G27 269 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 ARHGAP9Q9BRR9 750 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 WWTR1Q9GZV5 400 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 CCNB1IP1Q9NPC3 277 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 NXT1Q9UKK6 140 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 SNX5Q9Y5X3 404 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 ATMQ13315 3056 aa13.4□□□□□ -0.26
POLR2J3-204ENST00000486319 SAGE2PA6NJ88 616 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 SCDO00767 359 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 FAM20BO75063 409 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 WBP4O75554 376 aaKnown RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 CSTAP01040 98 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 TTKP33981 857 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 OMPP47874 163 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 PLAURQ03405 335 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 TBR1Q16650 682 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 CRTC2Q53ET0 693 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 KLHL26Q53HC5 615 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 LCN10Q6JVE6 187 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 MRPL14Q6P1L8 145 aaKnown RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 PCSK4Q6UW60 755 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 KCTD8Q6ZWB6 473 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 LSMEM1Q8N8F7 131 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 OR4C3Q8NH37 302 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 TMEM255BQ8WV15 326 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 APH1BQ8WW43 257 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 TRUB1Q8WWH5 349 aaKnown RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 IPCEF1Q8WWN9 437 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 EFHD2Q96C19 240 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 NODALQ96S42 347 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 PRSS27Q9BQR3 290 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 DUSP21Q9H596 190 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 WDR54Q9H977 334 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 PLCXD1Q9NUJ7 323 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 C19orf25Q9UFG5 118 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 GPN3Q9UHW5 284 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 FARSAQ9Y285 508 aaKnown RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 IGSF10Q6WRI0 2623 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 HEATR5AQ86XA9 2040 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 EXPH5Q8NEV8 1989 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 PTGES3LE9PB15 166 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 CHP2O43745 196 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 XPNPEP2O43895 674 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 BCAS1O75363 584 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 SOX14O95416 240 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 TP53P04637 393 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 GABRB1P18505 474 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 FPR3P25089 353 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 IL12BP29460 328 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 ACAA2P42765 397 aaKnown RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 RNF144AP50876 292 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 GPR143P51810 404 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 SLC35A2P78381 396 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 CDC20Q12834 499 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 TMEM236Q5W0B7 351 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 C12orf73Q69YU5 71 aa13.39□□□□□ -0.27
POLR2J3-204ENST00000486319 CASP12Q6UXS9 341 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms