RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 RAC3P60763 192 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 STX5Q13190 355 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 MYBPHQ13203 477 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 PON3Q15166 354 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 SGCBQ16585 318 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 ZSWIM7Q19AV6 140 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 FAM174BQ3ZCQ3 159 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 ATAD3BQ5T9A4 648 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 ZNF474Q6S9Z5 364 aaPredicted RBP6.28□□□□□ -1.4
VPS50-218ENST00000485994 CBLN3Q6UW01 205 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 LRRC74BQ6ZQY2 392 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 EIF3MQ7L2H7 374 aaKnown RBP6.28□□□□□ -1.4
VPS50-218ENST00000485994 P4HA3Q7Z4N8 544 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 BTLAQ7Z6A9 289 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 GALNT10Q86SR1 603 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 CMIPQ8IY22 773 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 LILRA2Q8N149 483 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 SLC43A2Q8N370 569 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 FAM71CQ8NEG0 241 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 OR5D16Q8NGK9 328 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 OR10D3Q8NH80 312 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 OR5AK3PQ8NH89 298 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 OR2V1Q8NHB1 315 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 FBXO30Q8TB52 745 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 FNDC9Q8TBE3 224 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 XAGE5Q8WWM1 108 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 ST8SIA1Q92185 356 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 OSTF1Q92882 214 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 ZBTB9Q96C00 473 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 ROPN1LQ96C74 230 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 GMPPAQ96IJ6 420 aaPredicted RBP6.28□□□□□ -1.4
VPS50-218ENST00000485994 SLC35G5Q96KT7 338 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 ATP6V1G3Q96LB4 118 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 PPP1R36Q96LQ0 422 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 OR52E6Q96RD3 313 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 NPAS1Q99742 590 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 SLC39A3Q9BRY0 314 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 OR51I1Q9H343 314 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 WDR55Q9H6Y2 383 aaPredicted RBP6.28□□□□□ -1.4
VPS50-218ENST00000485994 EXOSC3Q9NQT5 275 aaKnown RBP6.28□□□□□ -1.4
VPS50-218ENST00000485994 THUMPD1Q9NXG2 353 aaKnown RBP6.28□□□□□ -1.4
VPS50-218ENST00000485994 DNAJB12Q9NXW2 375 aaKnown RBP6.28□□□□□ -1.4
VPS50-218ENST00000485994 NDRG3Q9UGV2 375 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 KCNE5Q9UJ90 142 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 MCTS1Q9ULC4 181 aaKnown RBP6.28□□□□□ -1.4
VPS50-218ENST00000485994 VDAC3Q9Y277 283 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 SLC35A3Q9Y2D2 325 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 CARD8Q9Y2G2 431 aa6.28□□□□□ -1.4
VPS50-218ENST00000485994 ALPK2Q86TB3 2170 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 DSCAMO60469 2012 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 CCDC154A6NI56 674 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 HMGN4O00479 90 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 FAAHO00519 579 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 EIF1AYO14602 144 aaKnown RBP6.27□□□□□ -1.41
VPS50-218ENST00000485994 KIAA0513O60268 411 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 SS18L1O75177 396 aaPredicted RBP6.27□□□□□ -1.41
VPS50-218ENST00000485994 AQP8O94778 261 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 KRT75O95678 551 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 KITP10721 976 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 UBL4AP11441 157 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 PPP3CBP16298 524 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 PGCP20142 388 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 PGM1P36871 562 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 APOBEC1P41238 236 aaKnown RBP6.27□□□□□ -1.41
VPS50-218ENST00000485994 MVDP53602 400 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 KCNJ10P78508 379 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 CBFBQ13951 182 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 RNPS1Q15287 305 aaKnown RBP6.27□□□□□ -1.41
VPS50-218ENST00000485994 GPR68Q15743 365 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 SLC9B1Q4ZJI4 515 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 PDZK1Q5T2W1 519 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 HBMQ6B0K9 141 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 TYW3Q6IPR3 259 aaKnown RBP6.27□□□□□ -1.41
VPS50-218ENST00000485994 VWA1Q6PCB0 445 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 FRRS1Q6ZNA5 592 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 BEND4Q6ZU67 534 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 HDXQ7Z353 690 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 C16orf62Q7Z3J2 963 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 MAVSQ7Z434 540 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 ANKRD46Q86W74 232 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 UBQLNLQ8IYU4 475 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 GCNT2Q8N0V5 402 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 ZNF619Q8N2I2 560 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 OR5M1Q8NGP8 315 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 OR6K3Q8NGY3 331 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 FBXO27Q8NI29 283 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 ZFP90Q8TF47 636 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 TMEM234Q8WY98 164 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 SMPDL3BQ92485 455 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 CPNE4Q96A23 557 aaPredicted RBP6.27□□□□□ -1.41
VPS50-218ENST00000485994 ZG16BQ96DA0 208 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 MBD6Q96DN6 1003 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 CHMP6Q96FZ7 201 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 SH3YL1Q96HL8 342 aaPredicted RBP6.27□□□□□ -1.41
VPS50-218ENST00000485994 ZNF845Q96IR2 970 aaPredicted RBP6.27□□□□□ -1.41
VPS50-218ENST00000485994 KLHL15Q96M94 604 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 RNF145Q96MT1 663 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 PANX1Q96RD7 426 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 ZBTB18Q99592 522 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 KLHDC3Q9BQ90 382 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms