RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 RTL6Q6ICC9 239 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 MTFR2Q6P444 385 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 B3GNT6Q6ZMB0 384 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 NET1Q7Z628 596 aaPredicted RBP10.7□□□□□ -0.7
HPS4-214ENST00000485842 ARPINQ7Z6K5 226 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 SERPINA11Q86U17 422 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 MARVELD2Q8N4S9 558 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 MEIOBQ8N635 442 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 ANKS4BQ8N8V4 417 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 POC1BQ8TC44 478 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 SSC4DQ8WTU2 575 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 ZNF524Q96C55 264 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 TRIB1Q96RU8 372 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 DMRTA2Q96SC8 542 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 ZNF607Q96SK3 696 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 SPATA5L1Q9BVQ7 753 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 SPATA9Q9BWV2 254 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 EXOSC3Q9NQT5 275 aaKnown RBP10.7□□□□□ -0.7
HPS4-214ENST00000485842 ARL8BQ9NVJ2 186 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 ZNF232Q9UNY5 417 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 USP22Q9UPT9 525 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 IFT52Q9Y366 437 aa10.7□□□□□ -0.7
HPS4-214ENST00000485842 GPC6Q9Y625 555 aaPredicted RBP10.7□□□□□ -0.7
HPS4-214ENST00000485842 PHF3Q92576 2039 aaKnown RBP10.69□□□□□ -0.7
HPS4-214ENST00000485842 ARHGAP21Q5T5U3 1957 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 C7orf72A4D263 438 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 CDHR4A6H8M9 788 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 AHRRA9YTQ3 701 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 KDM4EB2RXH2 506 aaPredicted RBP10.69□□□□□ -0.7
HPS4-214ENST00000485842 H0YC42 278 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 LINC01387J3KSC0 135 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 AP3D1O14617 1153 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 OPN1LWP04000 364 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 GKN3PP0CG01 181 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 GP1BBP13224 206 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 UQCRBP14927 111 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 CPN1P15169 458 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 IL11P20809 199 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 ME2P23368 584 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 PTGER4P35408 488 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 EIF1P41567 113 aaKnown RBP10.69□□□□□ -0.7
HPS4-214ENST00000485842 SLC6A8P48029 635 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 GZMMP51124 257 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 TPD52P55327 224 aaPredicted RBP10.69□□□□□ -0.7
HPS4-214ENST00000485842 CLDN20P56880 219 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 NUP107P57740 925 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 ADORA2A-AS1P86434 159 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 MERTKQ12866 999 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 VMACQ2NL98 169 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 TMEM44Q2T9K0 475 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 RNF220Q5VTB9 566 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 TMEM211Q6ICI0 200 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 POMZP3Q6PJE2 187 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 RPTNQ6XPR3 784 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 CALHM3Q86XJ0 350 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 SLC30A8Q8IWU4 369 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 CLIP4Q8N3C7 705 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 ATP6V1C2Q8NEY4 427 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 PHF10Q8WUB8 498 aaKnown RBP10.69□□□□□ -0.7
HPS4-214ENST00000485842 ST8SIA1Q92185 356 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 TUBA1CQ9BQE3 449 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 ARMC7Q9H6L4 198 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 CMTM6Q9NX76 183 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 TAGLN3Q9UI15 199 aa10.69□□□□□ -0.7
HPS4-214ENST00000485842 KIAA1549Q9HCM3 1950 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 CFAP73A6NFT4 308 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 CLCA1A8K7I4 914 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 FAM220BPB1ANY3 271 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 EIF1AYO14602 144 aaKnown RBP10.68□□□□□ -0.7
HPS4-214ENST00000485842 FRS3O43559 492 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 ADAM11O75078 769 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 SERPINB7O75635 380 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 HOXD4P09016 255 aaPredicted RBP10.68□□□□□ -0.7
HPS4-214ENST00000485842 GLI4P10075 376 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 PRG2P13727 222 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 PSMA4P25789 261 aaKnown RBP10.68□□□□□ -0.7
HPS4-214ENST00000485842 ELK4P28324 431 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 PRKAR1BP31321 381 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 SFTPDP35247 375 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 SMSP52788 366 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 SUCLG1P53597 346 aaKnown RBP10.68□□□□□ -0.7
HPS4-214ENST00000485842 SESN3P58005 492 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 PSME3P61289 254 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 MXRA7P84157 204 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 PMPCAQ10713 525 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 EPS8Q12929 822 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 SF3B4Q15427 424 aaKnown RBP eCLIP10.68□□□□□ -0.71e-9■■■■□ 23.3
HPS4-214ENST00000485842 ZSWIM7Q19AV6 140 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 INTS11Q5TA45 600 aaKnown RBP10.68□□□□□ -0.7
HPS4-214ENST00000485842 PPP4R4Q6NUP7 873 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 PLXDC2Q6UX71 529 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 HACD2Q6Y1H2 254 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 CHMP1BQ7LBR1 199 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 ARMC8Q8IUR7 673 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 SLC15A3Q8IY34 581 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 ZNF440Q8IYI8 595 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 FITM2Q8N6M3 262 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 SMYD1Q8NB12 490 aa10.68□□□□□ -0.7
HPS4-214ENST00000485842 OR2T12Q8NG77 320 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms