RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ING1Q9UK53 422 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-205ENST00000485397 DTNAQ9Y4J8 743 aa17.09■□□□□ 0.33
COL27A1-205ENST00000485397 ZNF814B7Z6K7 855 aa17.08■□□□□ 0.32
COL27A1-205ENST00000485397 SKAP2O75563 359 aaPredicted RBP17.08■□□□□ 0.32
COL27A1-205ENST00000485397 LYPLA1O75608 230 aaPredicted RBP17.08■□□□□ 0.32
COL27A1-205ENST00000485397 SOD3P08294 240 aa17.08■□□□□ 0.32
COL27A1-205ENST00000485397 KRT16P08779 473 aa17.08■□□□□ 0.32
COL27A1-205ENST00000485397 LSM12Q3MHD2 195 aaKnown RBP17.08■□□□□ 0.32
COL27A1-205ENST00000485397 HOMEZQ8IX15 550 aa17.08■□□□□ 0.32
COL27A1-205ENST00000485397 FNDC5Q8NAU1 212 aa17.08■□□□□ 0.32
COL27A1-205ENST00000485397 OR5W2Q8NH69 310 aa17.08■□□□□ 0.32
COL27A1-205ENST00000485397 SFXN5Q8TD22 340 aa17.08■□□□□ 0.32
COL27A1-205ENST00000485397 MRGPRX4Q96LA9 322 aa17.08■□□□□ 0.32
COL27A1-205ENST00000485397 GP6Q9HCN6 339 aa17.08■□□□□ 0.32
COL27A1-205ENST00000485397 ATAD3AQ9NVI7 634 aa17.08■□□□□ 0.32
COL27A1-205ENST00000485397 ZDHHC2Q9UIJ5 367 aa17.08■□□□□ 0.32
COL27A1-205ENST00000485397 ESPNB1AK53 854 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 C9JVG2 144 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 CFLARO15519 480 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 CD3EP07766 207 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 DANCRP0C864 163 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 CCR4P51679 360 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 RPS26P62854 115 aaKnown RBP17.07■□□□□ 0.32
COL27A1-205ENST00000485397 HBA1P69905 142 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 SELENBP1Q13228 472 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 QPRTQ15274 297 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 SLC25A53Q5H9E4 307 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 PDZK1Q5T2W1 519 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 OLIG3Q7RTU3 272 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 RIMKLAQ8IXN7 391 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 SLC43A2Q8N370 569 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 NATD1Q8N6N6 113 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 TMCO5AQ8N6Q1 288 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 MAPK1IP1LQ8NDC0 245 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 TCP10LQ8TDR4 215 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 HSD17B8Q92506 261 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 KISS1RQ969F8 398 aaPredicted RBP17.07■□□□□ 0.32
COL27A1-205ENST00000485397 ZNF775Q96BV0 537 aaPredicted RBP17.07■□□□□ 0.32
COL27A1-205ENST00000485397 SDF2Q99470 211 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 PRPF18Q99633 342 aaKnown RBP17.07■□□□□ 0.32
COL27A1-205ENST00000485397 DUSP26Q9BV47 211 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 SERHL2Q9H4I8 314 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 PRSS50Q9UI38 385 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 ADAM21Q9UKJ8 722 aa17.07■□□□□ 0.32
COL27A1-205ENST00000485397 ANK3Q12955 4377 aaKnown RBP17.07■□□□□ 0.32
COL27A1-205ENST00000485397 DPRXA6NFQ7 191 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 OVOL3O00110 214 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 ZNF264O43296 627 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 EIF4E2O60573 245 aaKnown RBP17.06■□□□□ 0.32
COL27A1-205ENST00000485397 CYP7B1O75881 506 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 SOX30O94993 753 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 H6PDO95479 791 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 UBL4AP11441 157 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 PRPS1L1P21108 318 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 EDNRAP25101 427 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 SLC7A1P30825 629 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 SOAT1P35610 550 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 RAC3P60763 192 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 KRTAP1-1Q07627 177 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 ITGADQ13349 1161 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 P2RY6Q15077 328 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 CLEC12BQ2HXU8 276 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 SEZ6L2Q6UXD5 910 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 BHLHA15Q7RTS1 189 aaPredicted RBP17.06■□□□□ 0.32
COL27A1-205ENST00000485397 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.06■□□□□ 0.32
COL27A1-205ENST00000485397 CLEC4FQ8N1N0 589 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 TOR1AIP2Q8NFQ8 470 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 KBTBD8Q8NFY9 601 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 SMAP2Q8WU79 429 aaPredicted RBP17.06■□□□□ 0.32
COL27A1-205ENST00000485397 FBXW5Q969U6 566 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 MOAP1Q96BY2 351 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 PSD2Q9BQI7 771 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 BHLHE41Q9C0J9 482 aaPredicted RBP17.06■□□□□ 0.32
COL27A1-205ENST00000485397 QRSL1Q9H0R6 528 aaKnown RBP17.06■□□□□ 0.32
COL27A1-205ENST00000485397 ESRP2Q9H6T0 727 aaKnown RBP17.06■□□□□ 0.32
COL27A1-205ENST00000485397 BCO1Q9HAY6 547 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 NGBQ9NPG2 151 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 KCNE5Q9UJ90 142 aa17.06■□□□□ 0.32
COL27A1-205ENST00000485397 CENPVL1A0A0U1RR11 272 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 SERINC4A6NH21 518 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 RNF223E7ERA6 249 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 ETV2O00321 342 aaPredicted RBP17.05■□□□□ 0.32
COL27A1-205ENST00000485397 LYZL6O75951 148 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 G6PDP11413 515 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 CREB1P16220 341 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 MATN1P21941 496 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 CDKN1AP38936 164 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 OR3A2P47893 321 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 BSPH1Q075Z2 132 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 RASGEF1BQ0VAM2 473 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 CBFBQ13951 182 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 VEZF1Q14119 521 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 GPR68Q15743 365 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 TIGD2Q4W5G0 525 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 C6orf120Q7Z4R8 191 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 CLECL1Q8IZS7 167 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 PIWIL2Q8TC59 973 aaKnown RBP17.05■□□□□ 0.32
COL27A1-205ENST00000485397 TUBGCP3Q96CW5 907 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 OR5B2Q96R09 309 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 ZNF300Q96RE9 604 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms