RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 TRAPPC13A5PLN9 417 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 PIP5K1CO60331 668 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 CD96P40200 585 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 EIF2S3P41091 472 aaKnown RBP13.25□□□□□ -0.29
LRIF1-202ENST00000485275 IDH2P48735 452 aaKnown RBP13.25□□□□□ -0.29
LRIF1-202ENST00000485275 DAPP51397 102 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 RRADP55042 308 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 TUBA3CQ13748 450 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 DAG1Q14118 895 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 MICAQ29983 383 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 ABHD17BQ5VST6 288 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 FAHD1Q6P587 224 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 TUBA3EQ6PEY2 450 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 MEX3DQ86XN8 651 aaKnown RBP13.25□□□□□ -0.29
LRIF1-202ENST00000485275 HIPK1Q86Z02 1210 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 FDCSPQ8NFU4 85 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 OR10G2Q8NGC3 310 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 MAGEE2Q8TD90 523 aaPredicted RBP13.25□□□□□ -0.29
LRIF1-202ENST00000485275 C3orf49Q96BT1 292 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 NRBF2Q96F24 287 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 DPH1Q9BZG8 443 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 DEPPQ9NTK1 212 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 MED11Q9P086 117 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 FBXL2Q9UKC9 423 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 KCNMB2Q9Y691 235 aa13.25□□□□□ -0.29
LRIF1-202ENST00000485275 BSNQ9UPA5 3926 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 IGLV3-32A0A0A0MS00 114 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 TP53I11O14683 189 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 EIF4E2O60573 245 aaKnown RBP13.24□□□□□ -0.29
LRIF1-202ENST00000485275 MITFO75030 526 aaPredicted RBP13.24□□□□□ -0.29
LRIF1-202ENST00000485275 LINGO3P0C6S8 592 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 CYB561P49447 251 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 P2RX1P51575 399 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 ST3GAL3Q11203 375 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 SPINK14Q6IE38 97 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 ZNF613Q6PF04 617 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 RTL4Q6ZR62 310 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 ZNF440Q8IYI8 595 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 DND1Q8IYX4 353 aaKnown RBP13.24□□□□□ -0.29
LRIF1-202ENST00000485275 PSD4Q8NDX1 1056 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 OR5W2Q8NH69 310 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 B4GALNT2Q8NHY0 566 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 SLC39A7Q92504 469 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 ZNF597Q96LX8 424 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 SECISBP2Q96T21 854 aaKnown RBP13.24□□□□□ -0.29
LRIF1-202ENST00000485275 FEVQ99581 238 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 GPA33Q99795 319 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 NIPSNAP1Q9BPW8 284 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 ZNF426Q9BUY5 554 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 ANGPTL4Q9BY76 406 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 HES7Q9BYE0 225 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 CCDC86Q9H6F5 360 aaKnown RBP13.24□□□□□ -0.29
LRIF1-202ENST00000485275 EVA1AQ9H8M9 152 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 USE1Q9NZ43 259 aa13.24□□□□□ -0.29
LRIF1-202ENST00000485275 ATMQ13315 3056 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 BOD1L1Q8NFC6 3051 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 CNTRLQ7Z7A1 2325 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 FAAHO00519 579 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 CHP2O43745 196 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 CBLP22681 906 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 DNASE1L1P49184 302 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 ALDH3A2P51648 485 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 CCL11P51671 97 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 UGT2B15P54855 530 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 C17orf67Q0P5P2 114 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 TRAM2Q15035 370 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 ALG10BQ5I7T1 473 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 DCST1Q5T197 706 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 KDM4DQ6B0I6 523 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 ARSKQ6UWY0 536 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 MISPQ8IVT2 679 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 APLFQ8IW19 511 aaPredicted RBP13.23□□□□□ -0.29
LRIF1-202ENST00000485275 OR4K5Q8NGD3 323 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 GPR119Q8TDV5 335 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 GIPC3Q8TF64 312 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 SGCZQ96LD1 299 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 PSD2Q9BQI7 771 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 TRIM2Q9C040 744 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 POLR2J2Q9GZM3 115 aaKnown RBP13.23□□□□□ -0.29
LRIF1-202ENST00000485275 POLR2J3Q9H1A7 115 aaKnown RBP13.23□□□□□ -0.29
LRIF1-202ENST00000485275 CPNE5Q9HCH3 593 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 PPP4R1LQ9P1A2 415 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 LRFN1Q9P244 771 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 TEKT2Q9UIF3 430 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 PRDM4Q9UKN5 801 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 CSAG2Q9Y5P2 127 aa13.23□□□□□ -0.29
LRIF1-202ENST00000485275 ANKRD11Q6UB99 2663 aaPredicted RBP13.23□□□□□ -0.29
LRIF1-202ENST00000485275 PINLYPA6NC86 204 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 CDC40O60508 579 aaKnown RBP eCLIP13.22□□□□□ -0.29
LRIF1-202ENST00000485275 CCNB2O95067 398 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 SNAP29O95721 258 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 GASTP01350 101 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 ITPKBP27987 946 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 GPR85P60893 370 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 OC90Q02509 493 aaPredicted RBP13.22□□□□□ -0.29
LRIF1-202ENST00000485275 TLE3Q04726 772 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 SNTA1Q13424 505 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 SLC22A10Q63ZE4 541 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 PGBD2Q6P3X8 592 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 LINC00114Q6XXX2 140 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms