RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 IL11P20809 199 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 PSMA4P25789 261 aaKnown RBP17.22■□□□□ 0.35
SNX17-206ENST00000484886 ELK4P28324 431 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 UQCRC1P31930 480 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 PGM1P36871 562 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 TFF3Q07654 80 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 RPS26P11Q5JNZ5 115 aaPredicted RBP17.22■□□□□ 0.35
SNX17-206ENST00000484886 PDSS1Q5T2R2 415 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 CGB2Q6NT52 195 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 POMZP3Q6PJE2 187 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 GGNQ86UU5 652 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 METTL25Q8N6Q8 603 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 RELL2Q8NC24 303 aaPredicted RBP17.22■□□□□ 0.35
SNX17-206ENST00000484886 OR10D3Q8NH80 312 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 OR2V1Q8NHB1 315 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 FNDC9Q8TBE3 224 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 SLC38A5Q8WUX1 472 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 TMEM234Q8WY98 164 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 FIG4Q92562 907 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 TMEM19Q96HH6 336 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 MRGPRX4Q96LA9 322 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 SLC52A3Q9NQ40 469 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 NPDC1Q9NQX5 325 aaPredicted RBP17.22■□□□□ 0.35
SNX17-206ENST00000484886 VAPAQ9P0L0 249 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 NDUFAF1Q9Y375 327 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 GJE1A6NN92 205 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 EVPLLA8MZ36 301 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 BCAS1O75363 584 aaPredicted RBP17.21■□□□□ 0.35
SNX17-206ENST00000484886 SYNGR4O95473 234 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 NUDT7P0C024 238 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 TFPTP0C1Z6 253 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 FCGR2AP12318 317 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 HOXB9P17482 250 aaPredicted RBP17.21■□□□□ 0.35
SNX17-206ENST00000484886 ADH6P28332 368 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 ASCL1P50553 236 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 FOXF2Q12947 444 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 HBMQ6B0K9 141 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 OR2A2Q6IF42 318 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 ESPNLQ6ZVH7 1005 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 DHDDSQ86SQ9 333 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 MSRB3Q8IXL7 192 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 CMIPQ8IY22 773 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 CNEP1R1Q8N9A8 125 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 CNOT9Q92600 299 aaKnown RBP17.21■□□□□ 0.35
SNX17-206ENST00000484886 PMM1Q92871 262 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 KLHL15Q96M94 604 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 SFXN3Q9BWM7 321 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 MCTS1Q9ULC4 181 aaKnown RBP17.21■□□□□ 0.35
SNX17-206ENST00000484886 CORO2BQ9UQ03 480 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 ZNF175Q9Y473 711 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 UNC79Q9P2D8 2635 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 HCFC1P51610 2035 aa17.21■□□□□ 0.35
SNX17-206ENST00000484886 HEATR5AQ86XA9 2040 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 CXCL13O43927 109 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 IL18BPO95998 194 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 SLC6A8P48029 635 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 MERTKQ12866 999 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 TMEM176BQ3YBM2 270 aaPredicted RBP17.2■□□□□ 0.34
SNX17-206ENST00000484886 LIN52Q52LA3 116 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 GCNT6Q5T4J0 391 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 AP1ARQ63HQ0 302 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 MCEMP1Q8IX19 187 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 FAM71CQ8NEG0 241 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 OR52P1PQ8NH57 321 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 ST8SIA1Q92185 356 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 MAL2Q969L2 176 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 SPOCK3Q9BQ16 436 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 TREX2Q9BQ50 279 aaPredicted RBP17.2■□□□□ 0.34
SNX17-206ENST00000484886 A4GALTQ9NPC4 353 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 MRGBPQ9NV56 204 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 PAQR5Q9NXK6 330 aaPredicted RBP17.2■□□□□ 0.34
SNX17-206ENST00000484886 CENPEQ02224 2701 aa17.2■□□□□ 0.34
SNX17-206ENST00000484886 INTS1Q8N201 2190 aaKnown RBP17.2■□□□□ 0.34
SNX17-206ENST00000484886 A0A0G2JPF8 293 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 A0A0J9YW62 118 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 HNRNPCL2B2RXH8 293 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 HNRNPCL3B7ZW38 293 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 HNRNPCL1O60812 293 aaKnown RBP17.19■□□□□ 0.34
SNX17-206ENST00000484886 PLGP00747 810 aaPredicted RBP17.19■□□□□ 0.34
SNX17-206ENST00000484886 HNRNPCL4P0DMR1 293 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 NID1P14543 1247 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 UQCRBP14927 111 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 RPS4Y1P22090 263 aaKnown RBP17.19■□□□□ 0.34
SNX17-206ENST00000484886 SHC1P29353 583 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 SLC7A1P30825 629 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 CPA2P48052 419 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 CARD18P57730 90 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 SESN3P58005 492 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 SIRPAP78324 504 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 SELENBP1Q13228 472 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 NFYCQ13952 458 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 LARS2Q15031 903 aaKnown RBP17.19■□□□□ 0.34
SNX17-206ENST00000484886 MAPK11Q15759 364 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 MRPL2Q5T653 305 aaKnown RBP17.19■□□□□ 0.34
SNX17-206ENST00000484886 VRK2Q86Y07 508 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 MED12LQ86YW9 2145 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 REXO5Q96IC2 774 aaKnown RBP17.19■□□□□ 0.34
SNX17-206ENST00000484886 ENKD1Q9H0I2 346 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 TIGARQ9NQ88 270 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms