RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 THAP9Q9H5L6 903 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 ROPN1Q9HAT0 212 aaPredicted RBP2.76□□□□□ -1.97
CCDC66-219ENST00000484441 NECAP2Q9NVZ3 263 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 C6orf203Q9P0P8 240 aaPredicted RBP2.76□□□□□ -1.97
CCDC66-219ENST00000484441 ZNF223Q9UK11 482 aaPredicted RBP2.76□□□□□ -1.97
CCDC66-219ENST00000484441 TP53TG5Q9Y2B4 290 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 PTCH1Q13635 1447 aa2.76□□□□□ -1.97
CCDC66-219ENST00000484441 ABCC4O15439 1325 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 IGHV3-64DA0A0J9YX35 117 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 A6NDX4 124 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 GJE1A6NN92 205 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 NBR2O15453 112 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 LALBAP00709 142 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 PCCAP05165 728 aaPredicted RBP2.75□□□□□ -1.97
CCDC66-219ENST00000484441 RRASP10301 218 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 CCNCP24863 283 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 ADSSP30520 456 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 BDKRB1P46663 353 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 CSNK1DP48730 415 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 SUCLG1P53597 346 aaKnown RBP2.75□□□□□ -1.97
CCDC66-219ENST00000484441 STARD6P59095 220 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 HERVK_113P61574 105 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 AP1B1Q10567 949 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 SHHQ15465 462 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 LINC01620Q4KN68 170 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 DNAJC21Q5F1R6 531 aaKnown RBP2.75□□□□□ -1.97
CCDC66-219ENST00000484441 LINC01551Q86U37 167 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 ZNF561Q8N587 486 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 NKAPP1Q8N9T2 125 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 Q8N9W7 124 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 KIR2DL5BQ8NHK3 375 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 CTRCQ99895 268 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 VCXQ9H320 206 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 AGPAT5Q9NUQ2 364 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 ATP6V1HQ9UI12 483 aa2.75□□□□□ -1.97
CCDC66-219ENST00000484441 FAM230AA0A1W2PPH8 454 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 ERVV-1B6SEH8 477 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 H3BMQ9 156 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 GFYI3L273 518 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 SULT2B1O00204 365 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 FAM189A1O60320 539 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 FOXH1O75593 365 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 SLITRK3O94933 977 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 CCDC192P0DO97 292 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 MAGP20916 626 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 PMELP40967 661 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 PLK1P53350 603 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 CSNK1G2P78368 415 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 RAB40BQ12829 278 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 TSPO2Q5TGU0 170 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 ZFP2Q6ZN57 461 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 COX15Q7KZN9 410 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 CBWD2Q8IUF1 395 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 SAXO1Q8IYX7 474 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 KDM8Q8N371 416 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 ZNF713Q8N859 430 aaPredicted RBP2.74□□□□□ -1.97
CCDC66-219ENST00000484441 CNIH3Q8TBE1 160 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 NANPQ8TBE9 248 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 GIPC3Q8TF64 312 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 RNF185Q96GF1 192 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 KLHDC3Q9BQ90 382 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 NRIP2Q9BQI9 281 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.74□□□□□ -1.97
CCDC66-219ENST00000484441 SPASTQ9UBP0 616 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 PRPF19Q9UMS4 504 aaKnown RBP2.74□□□□□ -1.97
CCDC66-219ENST00000484441 SPACA6W5XKT8 324 aa2.74□□□□□ -1.97
CCDC66-219ENST00000484441 IGLV4-69A0A075B6H9 119 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 A0A0G2JRQ6 117 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 RIPK2O43353 540 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 TOM1L1O75674 476 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 MT-ATP6P00846 226 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 RNH1P13489 461 aaKnown RBP2.73□□□□□ -1.97
CCDC66-219ENST00000484441 COX7A1P24310 79 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 CHRNB3Q05901 458 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 WASHC5Q12768 1159 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 ACP7Q6ZNF0 438 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 RFLNAQ6ZTI6 216 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 LHFPL4Q7Z7J7 247 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 SVOPLQ8N434 492 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 OR51G1Q8NGK1 321 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 PAQR8Q8TEZ7 354 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 CHCHD10Q8WYQ3 142 aaPredicted RBP2.73□□□□□ -1.97
CCDC66-219ENST00000484441 FCGR1BQ92637 280 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 RPUSD4Q96CM3 377 aaKnown RBP2.73□□□□□ -1.97
CCDC66-219ENST00000484441 SAMD8Q96LT4 415 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 OR2M2Q96R28 347 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 ECT2Q9H8V3 914 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 OARD1Q9Y530 152 aa2.73□□□□□ -1.97
CCDC66-219ENST00000484441 A0A1W2PQ67 120 aa2.72□□□□□ -1.97
CCDC66-219ENST00000484441 CCDC173Q0VFZ6 552 aa2.72□□□□□ -1.97
CCDC66-219ENST00000484441 PDK1Q15118 436 aa2.72□□□□□ -1.97
CCDC66-219ENST00000484441 PAGE3Q5JUK9 113 aa2.72□□□□□ -1.97
CCDC66-219ENST00000484441 C1orf146Q5VVC0 180 aa2.72□□□□□ -1.97
CCDC66-219ENST00000484441 NRMQ8IXM6 262 aa2.72□□□□□ -1.97
CCDC66-219ENST00000484441 AENQ8WTP8 325 aaKnown RBP2.72□□□□□ -1.97
CCDC66-219ENST00000484441 CRNKL1Q9BZJ0 848 aaKnown RBP2.72□□□□□ -1.97
CCDC66-219ENST00000484441 POLR2J2Q9GZM3 115 aaKnown RBP2.72□□□□□ -1.97
CCDC66-219ENST00000484441 POLR2J3Q9H1A7 115 aaKnown RBP2.72□□□□□ -1.97
CCDC66-219ENST00000484441 ZNF385DQ9H6B1 395 aa2.72□□□□□ -1.97
CCDC66-219ENST00000484441 SLC25A22Q9H936 323 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms