RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 NATD1Q8N6N6 113 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 ANKRD42Q8N9B4 389 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 TOR1AIP2Q8NFQ8 470 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 ZFP90Q8TF47 636 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 MOAP1Q96BY2 351 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 PLPPR2Q96GM1 343 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 MARK4Q96L34 752 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 THUMPD3Q9BV44 507 aaKnown RBP17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 TIGARQ9NQ88 270 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 PCDHGB4Q9UN71 923 aa17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 GPC6Q9Y625 555 aaPredicted RBP17.13■□□□□ 0.33
NDUFA3-213ENST00000484103 ACANP16112 2415 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 ZNF264O43296 627 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 ATP8B1O43520 1251 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 OR12D1P0DN82 309 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 ENPP1P22413 925 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 LOXP28300 417 aaPredicted RBP17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 ELK4P28324 431 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 GTF2IRD2BQ6EKJ0 949 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 BHLHB9Q6PI77 547 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 BEND4Q6ZU67 534 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 FCRLAQ7L513 359 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 GTF2IRD2Q86UP8 949 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 OR5W2Q8NH69 310 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 RNF128Q8TEB7 428 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 XAGE5Q8WWM1 108 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 CPNE4Q96A23 557 aaPredicted RBP17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 C18orf12Q96KH6 178 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 Q96MF0 132 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 OR5B2Q96R09 309 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 COQ10BQ9H8M1 238 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 GLRX2Q9NS18 164 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 PNPOQ9NVS9 261 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 KCNE5Q9UJ90 142 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 RAP2CQ9Y3L5 183 aa17.12■□□□□ 0.33
NDUFA3-213ENST00000484103 NUP214P35658 2090 aaPredicted RBP17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 SERINC4A6NH21 518 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 GJE1A6NN92 205 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 NPIPB9F8W1W9 429 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 ARHGEF9O43307 516 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 CSTAP01040 98 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 C1QCP02747 245 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 FPR1P21462 350 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 RPL14P50914 215 aaKnown RBP17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 SUMO3P55854 103 aaPredicted RBP17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 CBFBQ13951 182 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 CAPRIN1Q14444 709 aaKnown RBP17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 BEX5Q5H9J7 111 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 AGBL2Q5U5Z8 902 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 ZNF704Q6ZNC4 412 aaPredicted RBP17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 CIARTQ8N365 385 aaPredicted RBP17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 MGARPQ8TDB4 240 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 PIGTQ969N2 578 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 S100PBPQ96BU1 408 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 TLCD1Q96CP7 247 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 SORT1Q99523 831 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 KLHL13Q9P2N7 655 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 ACTL7BQ9Y614 415 aa17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 FLNAP21333 2647 aaKnown RBP17.11■□□□□ 0.33
NDUFA3-213ENST00000484103 H7C1Q1 480 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 KLF4O43474 513 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 BCAS1O75363 584 aaPredicted RBP17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 STX11O75558 287 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 INHBBP09529 407 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 HOXB4P17483 251 aaPredicted RBP17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 IL32P24001 234 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 RYKP34925 604 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 CHI3L1P36222 383 aaPredicted RBP17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 MERTKQ12866 999 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 SELENBP1Q13228 472 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 STX3Q13277 289 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 MPP2Q14168 576 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 TIGD2Q4W5G0 525 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 SPANXN4Q5MJ08 99 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 SHEQ5VZ18 495 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 CLEC9AQ6UXN8 241 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 TFAP2EQ6VUC0 442 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 YTHDF3Q7Z739 585 aaKnown RBP17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 ARL8AQ96BM9 186 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 MRGPRX4Q96LA9 322 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 FANCFQ9NPI8 374 aa17.1■□□□□ 0.33
NDUFA3-213ENST00000484103 TRIM64A6NGJ6 449 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 TRIM64BA6NI03 449 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 RNASET2O00584 256 aaKnown RBP17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 BIRC5O15392 142 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 CLOCKO15516 846 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 UGT2B17O75795 530 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 PRKD3O94806 890 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 H6PDO95479 791 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 ADAP00813 363 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 PABPC4LP0CB38 370 aaKnown RBP17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 TFPIP10646 304 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 FOSL1P15407 271 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 CCNA2P20248 432 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 PCYT1AP49585 367 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 PHC1P78364 1004 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 SKP2Q13309 424 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 RNPS1Q15287 305 aaKnown RBP17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 MAPK14Q16539 360 aa17.09■□□□□ 0.33
NDUFA3-213ENST00000484103 GPAT3Q53EU6 434 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms