RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ZNHIT1O43257 154 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 PRKNO60260 465 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 MPZL2O60487 215 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 PRAMEF2O60811 474 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 NOL3O60936 208 aaKnown RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 NME6O75414 186 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 WISP2O76076 250 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 WISP1O95388 367 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ANGPTL1O95841 491 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 IFNA16P05015 189 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 LINGO3P0C6S8 592 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ACP2P11117 423 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ELAVL4P26378 380 aaKnown RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ELK4P28324 431 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 GALNSP34059 522 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 GABRA3P34903 492 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 STT3AP46977 705 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 LIMS1P48059 325 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 CLK3P49761 638 aaKnown RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 RGS8P57771 180 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 CDC42P60953 191 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ISL1P61371 349 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 RPP38P78345 283 aaKnown RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 SRSF1Q07955 248 aaKnown RBP eCLIP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 CD47Q08722 323 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ST3GAL3Q11203 375 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 DUSP8Q13202 625 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 DGCR6Q14129 220 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 INPP5JQ15735 1006 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 NSDHLQ15738 373 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 GPR68Q15743 365 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 DUSP5Q16690 384 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 MEP1AQ16819 746 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ZSWIM7Q19AV6 140 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 DCST2Q5T1A1 773 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 FHL5Q5TD97 284 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ANKRD34AQ69YU3 496 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF773Q6PK81 442 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 NDUFAF7Q7L592 441 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 TSEN54Q7Z6J9 526 aaKnown RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 RANBP3LQ86VV4 465 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF619Q8N2I2 560 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 PARP8Q8N3A8 854 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF321PQ8N8H1 164 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 AQP11Q8NBQ7 271 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 BPIFB6Q8NFQ5 453 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 TOR1AIP2Q8NFQ8 470 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 OR52R1Q8NGF1 315 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 CPT1CQ8TCG5 803 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ADAMTS16Q8TE57 1224 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 THAP3Q8WTV1 239 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 METTL21AQ8WXB1 218 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 MIB2Q96AX9 1013 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 CTHRC1Q96CG8 243 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 SNRNP40Q96DI7 357 aaKnown RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 HRASLS5Q96KN8 279 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 DHRS1Q96LJ7 313 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 IMMP1LQ96LU5 166 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 PTCHD1Q96NR3 888 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 IP6K3Q96PC2 410 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 MYCBPQ99417 103 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 PITX2Q99697 317 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ARHGDIGQ99819 225 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 CNPPD1Q9BV87 410 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 UCK2Q9BZX2 261 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 LHPPQ9H008 270 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF700Q9H0M5 742 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 LIN28AQ9H9Z2 209 aaKnown RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 CXorf21Q9HAI6 301 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 Q9N2J8 555 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 CCNB1IP1Q9NPC3 277 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ASF1BQ9NVP2 202 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 IMPAD1Q9NX62 359 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 RHCGQ9UBD6 479 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 PRODH2Q9UF12 536 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ACAD8Q9UKU7 415 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 MKLN1Q9UL63 735 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 NDRG4Q9ULP0 352 aaKnown RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 CFL2Q9Y281 166 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF443Q9Y2A4 671 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 KCNE3Q9Y6H6 103 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 DOPEY2Q9Y3R5 2298 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 USP9XQ93008 2570 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 TRIM64A6NGJ6 449 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 PRAMEF25A6NGN4 478 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 AGAP5A6NIR3 686 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 TRIM64CA6NLI5 447 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 CYSRT1A8MQ03 144 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 SLC1A7O00341 560 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 PCDH17O14917 1159 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 MRPS14O60783 128 aaKnown RBP6.36□□□□□ -1.39
BRCA1-216ENST00000484087 NKX2-2O95096 273 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 WDPCPO95876 746 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 IGHEP01854 428 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 GUSBP08236 651 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 CD63P08962 238 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 OSMP13725 252 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 GSTM3P21266 225 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 CBLP22681 906 aa6.36□□□□□ -1.39
BRCA1-216ENST00000484087 CRHBPP24387 322 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms