RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 RPL3P39023 403 aaKnown RBP16.01■□□□□ 0.15
ATG4B-221ENST00000483778 CLDN8P56748 225 aa16.01■□□□□ 0.15
ATG4B-221ENST00000483778 IFFO1Q0D2I5 559 aa16.01■□□□□ 0.15
ATG4B-221ENST00000483778 CAPRIN1Q14444 709 aaKnown RBP16.01■□□□□ 0.15
ATG4B-221ENST00000483778 QPRTQ15274 297 aa16.01■□□□□ 0.15
ATG4B-221ENST00000483778 GPR68Q15743 365 aa16.01■□□□□ 0.15
ATG4B-221ENST00000483778 FCRLAQ7L513 359 aa16.01■□□□□ 0.15
ATG4B-221ENST00000483778 C6orf120Q7Z4R8 191 aa16.01■□□□□ 0.15
ATG4B-221ENST00000483778 ZNF527Q8NB42 609 aa16.01■□□□□ 0.15
ATG4B-221ENST00000483778 AENQ8WTP8 325 aaKnown RBP16.01■□□□□ 0.15
ATG4B-221ENST00000483778 BHLHE41Q9C0J9 482 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-221ENST00000483778 ATAD3AQ9NVI7 634 aa16.01■□□□□ 0.15
ATG4B-221ENST00000483778 KLHL13Q9P2N7 655 aa16.01■□□□□ 0.15
ATG4B-221ENST00000483778 GPC6Q9Y625 555 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-221ENST00000483778 HS3ST1O14792 307 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 H6PDO95479 791 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 CNOT4O95628 575 aaKnown RBP16■□□□□ 0.15
ATG4B-221ENST00000483778 ADAP00813 363 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 MATN1P21941 496 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 ELK4P28324 431 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 ADH6P28332 368 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 SOAT1P35610 550 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 NR1H2P55055 460 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 EMX2Q04743 252 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 MAPK14Q16539 360 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 SLC25A53Q5H9E4 307 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 TMEM201Q5SNT2 666 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 SFRP5Q5T4F7 317 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 GTF2IRD2BQ6EKJ0 949 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 SEZ6L2Q6UXD5 910 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 ZC3HAV1Q7Z2W4 902 aaKnown RBP16■□□□□ 0.15
ATG4B-221ENST00000483778 HMGN2P46Q86SG4 172 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 GTF2IRD2Q86UP8 949 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 STK32CQ86UX6 486 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 PRIMA1Q86XR5 153 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 OR5W2Q8NH69 310 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 AKAP1Q92667 903 aaKnown RBP eCLIP16■□□□□ 0.15
ATG4B-221ENST00000483778 ZNF75CPQ92670 426 aaPredicted RBP16■□□□□ 0.15
ATG4B-221ENST00000483778 CPNE4Q96A23 557 aaPredicted RBP16■□□□□ 0.15
ATG4B-221ENST00000483778 ZG16BQ96DA0 208 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 BDH2Q9BUT1 245 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 THUMPD3Q9BV44 507 aaKnown RBP16■□□□□ 0.15
ATG4B-221ENST00000483778 ROPN1BQ9BZX4 212 aaPredicted RBP16■□□□□ 0.15
ATG4B-221ENST00000483778 AKTIPQ9H8T0 292 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 ROPN1Q9HAT0 212 aaPredicted RBP16■□□□□ 0.15
ATG4B-221ENST00000483778 ZNF701Q9NV72 531 aaPredicted RBP16■□□□□ 0.15
ATG4B-221ENST00000483778 PRSS50Q9UI38 385 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 MKLN1Q9UL63 735 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 HIVEP2P31629 2446 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 PLCE1Q9P212 2302 aa16■□□□□ 0.15
ATG4B-221ENST00000483778 SONP18583 2426 aaKnown RBP15.99■□□□□ 0.15
ATG4B-221ENST00000483778 SERINC4A6NH21 518 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 H3BNH8 94 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 ZNF264O43296 627 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 SCN2BO60939 215 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 PRKD3O94806 890 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 YES1P07947 543 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 SERPINB5P36952 375 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 SUMO3P55854 103 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-221ENST00000483778 C21orf58P58505 322 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 SKP2Q13309 424 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 RNPS1Q15287 305 aaKnown RBP15.99■□□□□ 0.15
ATG4B-221ENST00000483778 TAB1Q15750 504 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 PDCD2Q16342 344 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-221ENST00000483778 ANKRD46Q86W74 232 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 NUDCD3Q8IVD9 361 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 TMCO5AQ8N6Q1 288 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 ZNF611Q8N823 705 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 ZNF781Q8N8C0 355 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 ZFP90Q8TF47 636 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 RAB8BQ92930 207 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 REXO5Q96IC2 774 aaKnown RBP15.99■□□□□ 0.15
ATG4B-221ENST00000483778 MRGPRX4Q96LA9 322 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 ZNF300Q96RE9 604 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-221ENST00000483778 PRPF18Q99633 342 aaKnown RBP15.99■□□□□ 0.15
ATG4B-221ENST00000483778 TIGARQ9NQ88 270 aa15.99■□□□□ 0.15
ATG4B-221ENST00000483778 ABCA1O95477 2261 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 ETV2O00321 342 aaPredicted RBP15.98■□□□□ 0.15
ATG4B-221ENST00000483778 SMAD9O15198 467 aaKnown RBP15.98■□□□□ 0.15
ATG4B-221ENST00000483778 EIF4E2O60573 245 aaKnown RBP15.98■□□□□ 0.15
ATG4B-221ENST00000483778 DNAJA2O60884 412 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 UGT2B17O75795 530 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 CYP7B1O75881 506 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 UBL4AP11441 157 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 PAX1P15863 534 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 DDX5P17844 614 aaKnown RBP15.98■□□□□ 0.15
ATG4B-221ENST00000483778 PCSK6P29122 969 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 CCR4P51679 360 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 SESN3P58005 492 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 MPP2Q14168 576 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 ZNF141Q15928 474 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 ARHGAP11BQ3KRB8 267 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 TIGD2Q4W5G0 525 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 NCMAPQ5T1S8 102 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 STEAP2Q8NFT2 490 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 TRIM44Q96DX7 344 aaPredicted RBP15.98■□□□□ 0.15
ATG4B-221ENST00000483778 DNAJA3Q96EY1 480 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 PSD2Q9BQI7 771 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 NMUR2Q9GZQ4 415 aa15.98■□□□□ 0.15
ATG4B-221ENST00000483778 LAT2Q9GZY6 243 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms