RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 QPRTQ15274 297 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 SLC25A35Q3KQZ1 300 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 REEP3Q6NUK4 255 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 SEM1Q6ZVN7 128 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 OLIG3Q7RTU3 272 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 RETREG3Q86VR2 466 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 KRT73Q86Y46 540 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 SLC30A8Q8IWU4 369 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 OR5M1Q8NGP8 315 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 RP9Q8TA86 221 aaKnown RBP14.73□□□□□ -0.05
CCDC78-212ENST00000482152 SLC35B4Q969S0 331 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 CPPED1Q9BRF8 314 aaPredicted RBP14.73□□□□□ -0.05
CCDC78-212ENST00000482152 SPATA9Q9BWV2 254 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 KCNJ16Q9NPI9 418 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 TIGARQ9NQ88 270 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 SERINC1Q9NRX5 453 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 ACER3Q9NUN7 267 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 Q9UFV3 132 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 ZNF175Q9Y473 711 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 DOPEY1Q5JWR5 2465 aa14.73□□□□□ -0.05
CCDC78-212ENST00000482152 CENPVL1A0A0U1RR11 272 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 A1L4Q6 167 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 FBP2O00757 339 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 DVL2O14641 736 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 OIP5O43482 229 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 SNX3O60493 162 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 CRHP06850 196 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 CTSSP25774 331 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 OPRM1P35372 400 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 APOBEC1P41238 236 aaKnown RBP14.72□□□□□ -0.05
CCDC78-212ENST00000482152 HTR3AP46098 478 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 CCR4P51679 360 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 MAP2K6P52564 334 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 SEC24CP53992 1094 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 GNGT1P63211 74 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 CDK6Q00534 326 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 SF3A3Q12874 501 aaKnown RBP eCLIP14.72□□□□□ -0.05
CCDC78-212ENST00000482152 TRMT5Q32P41 509 aaKnown RBP14.72□□□□□ -0.05
CCDC78-212ENST00000482152 RNF220Q5VTB9 566 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 OR2A2Q6IF42 318 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 NCCRP1Q6ZVX7 275 aaPredicted RBP14.72□□□□□ -0.05
CCDC78-212ENST00000482152 SERPINA11Q86U17 422 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 UBQLNLQ8IYU4 475 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 LILRA2Q8N149 483 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 BHLHE22Q8NFJ8 381 aaPredicted RBP14.72□□□□□ -0.05
CCDC78-212ENST00000482152 FBXO27Q8NI29 283 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 POC1BQ8TC44 478 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 ZNF607Q96SK3 696 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 QRSL1Q9H0R6 528 aaKnown RBP14.72□□□□□ -0.05
CCDC78-212ENST00000482152 EVA1AQ9H8M9 152 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 CLCF1Q9UBD9 225 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 AP3M1Q9Y2T2 418 aa14.72□□□□□ -0.05
CCDC78-212ENST00000482152 COL12A1Q99715 3063 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 LOC100653049A0A140TA62 436 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 CDHR4A6H8M9 788 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 PRORSD1PA6NEY8 169 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 PRSS44E7EML9 344 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 SERPINB7O75635 380 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 KRT34O76011 436 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 TOXO94900 526 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 NUDT7P0C024 238 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 FCGR2AP12318 317 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 DRD4P21917 467 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 SUCLG1P53597 346 aaKnown RBP14.71□□□□□ -0.05
CCDC78-212ENST00000482152 CLDN15P56746 228 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 CLDN20P56880 219 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 SESN3P58005 492 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 FOXF1Q12946 379 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 SELENBP1Q13228 472 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 SGCBQ16585 318 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 NDUFAF6Q330K2 333 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 MRPL2Q5T653 305 aaKnown RBP14.71□□□□□ -0.05
CCDC78-212ENST00000482152 SP5Q6BEB4 398 aaPredicted RBP14.71□□□□□ -0.05
CCDC78-212ENST00000482152 ZNF550Q7Z398 422 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 GGNQ86UU5 652 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 CCDC71Q8IV32 467 aaPredicted RBP14.71□□□□□ -0.05
CCDC78-212ENST00000482152 C11orf65Q8NCR3 313 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 HIPK4Q8NE63 616 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 TNIP2Q8NFZ5 429 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 OR8J3Q8NGG0 315 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 ZNF563Q8TA94 476 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 LRRC58Q96CX6 371 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 LRRC46Q96FV0 321 aa14.71□□□□□ -0.05
CCDC78-212ENST00000482152 KAT8Q9H7Z6 458 aaKnown RBP14.71□□□□□ -0.05
CCDC78-212ENST00000482152 DNAJB12Q9NXW2 375 aaKnown RBP14.71□□□□□ -0.05
CCDC78-212ENST00000482152 SPIN1Q9Y657 262 aaPredicted RBP14.71□□□□□ -0.05
CCDC78-212ENST00000482152 PHF3Q92576 2039 aaKnown RBP14.71□□□□□ -0.05
CCDC78-212ENST00000482152 FREM3P0C091 2139 aa14.71□□□□□ -0.06
CCDC78-212ENST00000482152 NCOA6Q14686 2063 aaPredicted RBP14.7□□□□□ -0.06
CCDC78-212ENST00000482152 USP9YO00507 2555 aaPredicted RBP14.7□□□□□ -0.06
CCDC78-212ENST00000482152 CFAP73A6NFT4 308 aa14.7□□□□□ -0.06
CCDC78-212ENST00000482152 SLC22A20A6NK97 555 aa14.7□□□□□ -0.06
CCDC78-212ENST00000482152 SHISA8B8ZZ34 492 aa14.7□□□□□ -0.06
CCDC78-212ENST00000482152 MRASO14807 208 aa14.7□□□□□ -0.06
CCDC78-212ENST00000482152 SEC14L5O43304 696 aa14.7□□□□□ -0.06
CCDC78-212ENST00000482152 PABPC4LP0CB38 370 aaKnown RBP14.7□□□□□ -0.06
CCDC78-212ENST00000482152 PRKAR1BP31321 381 aa14.7□□□□□ -0.06
CCDC78-212ENST00000482152 CLK1P49759 484 aaKnown RBP14.7□□□□□ -0.06
CCDC78-212ENST00000482152 RNF144AP50876 292 aaPredicted RBP14.7□□□□□ -0.06
CCDC78-212ENST00000482152 CARD18P57730 90 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms