RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 TSSK6Q9BXA6 273 aa10.74□□□□□ -0.69
GGPS1-205ENST00000482013 FAM117AQ9C073 453 aa10.74□□□□□ -0.69
GGPS1-205ENST00000482013 CCDC90BQ9GZT6 254 aa10.74□□□□□ -0.69
GGPS1-205ENST00000482013 C11orf16Q9NQ32 467 aa10.74□□□□□ -0.69
GGPS1-205ENST00000482013 TMEM9BQ9NQ34 198 aa10.74□□□□□ -0.69
GGPS1-205ENST00000482013 TVP23BQ9NYZ1 205 aa10.74□□□□□ -0.69
GGPS1-205ENST00000482013 PTTG2Q9NZH5 202 aa10.74□□□□□ -0.69
GGPS1-205ENST00000482013 CNIH4Q9P003 139 aa10.74□□□□□ -0.69
GGPS1-205ENST00000482013 AASSQ9UDR5 926 aa10.74□□□□□ -0.69
GGPS1-205ENST00000482013 BAIAP2Q9UQB8 552 aa10.74□□□□□ -0.69
GGPS1-205ENST00000482013 PCDHGB6Q9Y5F9 930 aa10.74□□□□□ -0.69
GGPS1-205ENST00000482013 NPFFR2Q9Y5X5 522 aa10.74□□□□□ -0.69
GGPS1-205ENST00000482013 NCOR1O75376 2440 aa10.74□□□□□ -0.69
GGPS1-205ENST00000482013 PIP5K1CO60331 668 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 HCN1O60741 890 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 TRMUO75648 421 aaKnown RBP10.73□□□□□ -0.69
GGPS1-205ENST00000482013 RFPL3O75679 317 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 ZFAND5O76080 213 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 MT-ND2P03891 347 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 IGFBP1P08833 259 aaPredicted RBP10.73□□□□□ -0.69
GGPS1-205ENST00000482013 ACVR2AP27037 513 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 GRK5P34947 590 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 SLC26A5P58743 744 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 LSM11P83369 360 aaKnown RBP eCLIP10.73□□□□□ -0.69
GGPS1-205ENST00000482013 EIF3IQ13347 325 aaKnown RBP10.73□□□□□ -0.69
GGPS1-205ENST00000482013 TBCEQ15813 527 aaPredicted RBP10.73□□□□□ -0.69
GGPS1-205ENST00000482013 SYT6Q5T7P8 510 aaPredicted RBP10.73□□□□□ -0.69
GGPS1-205ENST00000482013 UBE2UQ5VVX9 321 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 RNLSQ5VYX0 342 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 LCN10Q6JVE6 187 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 ACSM5Q6NUN0 579 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 FAM198BQ6UWH4 519 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 B3GNT6Q6ZMB0 384 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 WDR88Q6ZMY6 472 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 SHISA6Q6ZSJ9 500 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 AHSA2Q719I0 299 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 STX19Q8N4C7 294 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 SUMF1Q8NBK3 374 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 PHOSPHO1Q8TCT1 267 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 FAR1Q8WVX9 515 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 TTC9Q92623 222 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 SGCDQ92629 289 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 RORBQ92753 470 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 FGF11Q92914 225 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 MR1Q95460 341 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 LMF1Q96S06 567 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 TSC22D3Q99576 134 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 TMEM43Q9BTV4 400 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 EDEM2Q9BV94 578 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 DDA1Q9BW61 102 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 ULBP3Q9BZM4 244 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 LHPPQ9H008 270 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 EGLN3Q9H6Z9 239 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 ACOT13Q9NPJ3 140 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 TBC1D23Q9NUY8 699 aa10.73□□□□□ -0.69
GGPS1-205ENST00000482013 MRPS18AQ9NVS2 196 aaKnown RBP10.73□□□□□ -0.69
GGPS1-205ENST00000482013 EXPH5Q8NEV8 1989 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 A0A1W2PQ72 361 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 EFCAB9A8MZ26 197 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 PRR33A8MZF0 331 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 M0R3G1 203 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 NDUFB5O43674 189 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 FADS1O60427 444 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 NOL3O60936 208 aaKnown RBP10.72□□□□□ -0.69
GGPS1-205ENST00000482013 ADAM11O75078 769 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 ICOSLGO75144 302 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 PTP4A3O75365 173 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 RAB40ALP0C0E4 278 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 ZNF28P17035 718 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 BMP7P18075 431 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 MAKP20794 623 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 GSTT1P30711 240 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 GPR4P46093 362 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 SLC9A3P48764 834 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 TMED10P49755 219 aaKnown RBP10.72□□□□□ -0.69
GGPS1-205ENST00000482013 ST3GAL4Q11206 333 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 IRF3Q14653 427 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 CD226Q15762 336 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 EXT1Q16394 746 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 SNAPC1Q16533 368 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 ISXQ2M1V0 245 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 PGGHGQ32M88 737 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 ANKDD1AQ495B1 522 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 PLAG1Q6DJT9 500 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 KIRREL2Q6UWL6 708 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 CLVS1Q8IUQ0 354 aaPredicted RBP10.72□□□□□ -0.69
GGPS1-205ENST00000482013 ERI1Q8IV48 349 aaKnown RBP10.72□□□□□ -0.69
GGPS1-205ENST00000482013 CADM2Q8N3J6 435 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 TCEANCQ8N8B7 351 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 OR2T33Q8NG76 320 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 OR52L1Q8NGH7 329 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 OR8D4Q8NGM9 314 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 OR2Y1Q8NGV0 311 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 RNF217Q8TC41 542 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 LIPHQ8WWY8 451 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 C3orf49Q96BT1 292 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 TMCO6Q96DC7 493 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 PRRX2Q99811 253 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 CDCA4Q9BXL8 241 aa10.72□□□□□ -0.69
GGPS1-205ENST00000482013 TBL1XR1Q9BZK7 514 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms