RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 FAM234BA2RU67 622 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 C7orf72A4D263 438 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 ANKRD65E5RJM6 399 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 GTPBP1O00178 669 aaKnown RBP10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 SYT5O00445 386 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 NR5A2O00482 541 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 DVL2O14641 736 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 STX11O75558 287 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 DNAJC8O75937 253 aaPredicted RBP10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 NUDT14O95848 222 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 UBL4AP11441 157 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 PRKCAP17252 672 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 LCN1P31025 176 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 PGM1P36871 562 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 ASCL1P50553 236 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 ZNF41P51814 821 aaPredicted RBP10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 QPRTQ15274 297 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 GUSBP1Q15486 140 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 GLYR1Q49A26 553 aaPredicted RBP10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 BHLHB9Q6PI77 547 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 CCDC121Q6ZUS5 278 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 P4HA3Q7Z4N8 544 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 GDF7Q7Z4P5 450 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 ZNF619Q8N2I2 560 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 MEIOBQ8N635 442 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 METTL25Q8N6Q8 603 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 CNEP1R1Q8N9A8 125 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 FAM71CQ8NEG0 241 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 VPS37AQ8NEZ2 397 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 ROBO4Q8WZ75 1007 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 HOXD1Q9GZZ0 328 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 SAP130Q9H0E3 1048 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 ZNF385DQ9H6B1 395 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 COQ10BQ9H8M1 238 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 NPHS2Q9NP85 383 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 ZNF629Q9UEG4 869 aaPredicted RBP10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 WDR45Q9Y484 360 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 PCDHB14Q9Y5E9 798 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 AP4B1Q9Y6B7 739 aa10.23□□□□□ -0.77
RAPGEF1-207ENST00000481260 A0A1W2PNR3 127 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 GMNCA6NCL1 334 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 ADAMDEC1O15204 470 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 ZNF264O43296 627 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 EDF1O60869 148 aaKnown RBP10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 IL6P05231 212 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 NID1P14543 1247 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 ZNF17P17021 662 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 RYKP34925 604 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 P2RX1P51575 399 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 MYBPHQ13203 477 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 FGFBP1Q14512 234 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 AGKQ53H12 422 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 C6orf10Q5SRN2 563 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 BLOC1S3Q6QNY0 202 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 ZNF474Q6S9Z5 364 aaPredicted RBP10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 C22orf34Q6ZV56 151 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 COMTD1Q86VU5 262 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 VRK2Q86Y07 508 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 MISPQ8IVT2 679 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 LILRA2Q8N149 483 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 ZNF527Q8NB42 609 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 GLB1L3Q8NCI6 653 aaPredicted RBP10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 OR5W2Q8NH69 310 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 OR2V1Q8NHB1 315 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 RNASE6Q93091 150 aaKnown RBP10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 MAL2Q969L2 176 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 ZBTB8AQ96BR9 441 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 TM9SF2Q99805 663 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 CCDC28BQ9BUN5 200 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 LAT2Q9GZY6 243 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 LIME1Q9H400 295 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 RNF122Q9H9V4 155 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 TPT1P8Q9HAU6 139 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 EXD2Q9NVH0 621 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 RLIMQ9NVW2 624 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 GALNT8Q9NY28 637 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 CCDC167Q9P0B6 97 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 CHST2Q9Y4C5 530 aa10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 TEP1Q99973 2627 aaKnown RBP10.22□□□□□ -0.77
RAPGEF1-207ENST00000481260 DUXAA6NLW8 204 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 FAM47E-STBD1D6RA91 191 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 DNAJA2O60884 412 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 SMNDC1O75940 238 aaKnown RBP eCLIP10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 TGDSO95455 350 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 IL18BPO95998 194 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 CSTAP01040 98 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 CGAP01215 116 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 TFPTP0C1Z6 253 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 RPS4Y1P22090 263 aaKnown RBP10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 EDNRAP25101 427 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 CCKARP32238 428 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 OPRM1P35372 400 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 CRATP43155 626 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 MRPL19P49406 292 aaKnown RBP10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 SESN3P58005 492 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 RAC1P63000 192 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 FAM27E3Q08E93 113 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 TMEM176BQ3YBM2 270 aaPredicted RBP10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 FBXL19-AS1Q494R0 122 aa10.21□□□□□ -0.77
RAPGEF1-207ENST00000481260 ATAD3BQ5T9A4 648 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms