RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 PRKCAP17252 672 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 PSMA4P25789 261 aaKnown RBP18.37■□□□□ 0.53
CTSA-206ENST00000480961 NUDT2P50583 147 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 SUCLG1P53597 346 aaKnown RBP18.37■□□□□ 0.53
CTSA-206ENST00000480961 PER3P56645 1201 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 CLDN15P56746 228 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 NUP107P57740 925 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 ART3Q13508 389 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 LARS2Q15031 903 aaKnown RBP18.37■□□□□ 0.53
CTSA-206ENST00000480961 ACSF3Q4G176 576 aaPredicted RBP18.37■□□□□ 0.53
CTSA-206ENST00000480961 PRAMEF8Q5VWM4 474 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 PRAMEF7Q5VXH5 474 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 B3GNT6Q6ZMB0 384 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 NET1Q7Z628 596 aaPredicted RBP18.37■□□□□ 0.53
CTSA-206ENST00000480961 PM20D2Q8IYS1 436 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 METTL25Q8N6Q8 603 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 C11orf65Q8NCR3 313 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 CCDC197Q8NCU1 140 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 HIPK4Q8NE63 616 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 TRIB1Q96RU8 372 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 CACYBPQ9HB71 228 aaKnown RBP18.37■□□□□ 0.53
CTSA-206ENST00000480961 CMTM6Q9NX76 183 aa18.37■□□□□ 0.53
CTSA-206ENST00000480961 CDHR4A6H8M9 788 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 AHRRA9YTQ3 701 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 FRS3O43559 492 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 EFNA2O43921 213 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 PABPC4LP0CB38 370 aaKnown RBP18.36■□□□□ 0.53
CTSA-206ENST00000480961 PRG2P13727 222 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 ZNF708P17019 499 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 ZNF17P17021 662 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 PGCP20142 388 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 SESN3P58005 492 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 POMZP3Q6PJE2 187 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 SERPINA11Q86U17 422 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 CALHM3Q86XJ0 350 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 CMIPQ8IY22 773 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 ANKS4BQ8N8V4 417 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 ZNF563Q8TA94 476 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 GPATCH1Q9BRR8 931 aaKnown RBP18.36■□□□□ 0.53
CTSA-206ENST00000480961 TTYH2Q9BSA4 534 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 ANGPT4Q9Y264 503 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 IFT52Q9Y366 437 aa18.36■□□□□ 0.53
CTSA-206ENST00000480961 GPC6Q9Y625 555 aaPredicted RBP18.36■□□□□ 0.53
CTSA-206ENST00000480961 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 C7orf72A4D263 438 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 WIPF3A6NGB9 483 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 TPST1O60507 370 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 DNAJA2O60884 412 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 GCM2O75603 506 aaPredicted RBP18.35■□□□□ 0.53
CTSA-206ENST00000480961 THBS1P07996 1170 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 GABRA1P14867 456 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 ETS2P15036 469 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 SHC1P29353 583 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 PRDX6P30041 224 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 IDH2P48735 452 aaKnown RBP18.35■□□□□ 0.53
CTSA-206ENST00000480961 HOXC5Q00444 222 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 RBBP4Q09028 425 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 BCL2A1Q16548 175 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 SEM1Q6ZVN7 128 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 COMTD1Q86VU5 262 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 KRT73Q86Y46 540 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 CCDC71Q8IV32 467 aaPredicted RBP18.35■□□□□ 0.53
CTSA-206ENST00000480961 FITM2Q8N6M3 262 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 OR10Q1Q8NGQ4 319 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 ZNF583Q96ND8 569 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 SPATA9Q9BWV2 254 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 EXOSC3Q9NQT5 275 aaKnown RBP18.35■□□□□ 0.53
CTSA-206ENST00000480961 AP4B1Q9Y6B7 739 aa18.35■□□□□ 0.53
CTSA-206ENST00000480961 FREM3P0C091 2139 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 A1L4Q6 167 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 CFAP73A6NFT4 308 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 LINC01387J3KSC0 135 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 OPN1SWP03999 348 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 PCGF2P35227 344 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 EIF1P41567 113 aaKnown RBP18.34■□□□□ 0.53
CTSA-206ENST00000480961 SLC7A2P52569 658 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 MERTKQ12866 999 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 VMACQ2NL98 169 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 GLIPR1L2Q4G1C9 344 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 RNF220Q5VTB9 566 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 TMEM211Q6ICI0 200 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 MTFR2Q6P444 385 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 MRGPRGQ86SM5 289 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 GGNQ86UU5 652 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 SLC15A3Q8IY34 581 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 EID3Q8N140 333 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 LILRA2Q8N149 483 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 MEIOBQ8N635 442 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 SMYD1Q8NB12 490 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 ZNF607Q96SK3 696 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 GTF3C1Q12789 2109 aa18.34■□□□□ 0.53
CTSA-206ENST00000480961 PCNX3Q9H6A9 2034 aa18.33■□□□□ 0.53
CTSA-206ENST00000480961 CLCA1A8K7I4 914 aa18.33■□□□□ 0.52
CTSA-206ENST00000480961 M0QX08 132 aa18.33■□□□□ 0.52
CTSA-206ENST00000480961 NDUFAB1O14561 156 aa18.33■□□□□ 0.52
CTSA-206ENST00000480961 EIF1AYO14602 144 aaKnown RBP18.33■□□□□ 0.52
CTSA-206ENST00000480961 NTN1O95631 604 aa18.33■□□□□ 0.52
CTSA-206ENST00000480961 EPPINO95925 133 aa18.33■□□□□ 0.52
CTSA-206ENST00000480961 HOXD4P09016 255 aaPredicted RBP18.33■□□□□ 0.52
CTSA-206ENST00000480961 GP1BBP13224 206 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms