RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 AGTR1P30556 359 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 APOBEC1P41238 236 aaKnown RBP10.25□□□□□ -0.77
CCM2-213ENST00000480658 CLK1P49759 484 aaKnown RBP10.25□□□□□ -0.77
CCM2-213ENST00000480658 FAM27E3Q08E93 113 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 BST1Q10588 318 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 P2RY6Q15077 328 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 GSTA3Q16772 222 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 FAM174BQ3ZCQ3 159 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 PDZK1Q5T2W1 519 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 C1QTNF12Q5T7M4 302 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 SHEQ5VZ18 495 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 SAXO2Q658L1 398 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 ZNF474Q6S9Z5 364 aaPredicted RBP10.25□□□□□ -0.77
CCM2-213ENST00000480658 MSANTD1Q6ZTZ1 278 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 FCRLAQ7L513 359 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 ZAR1Q86SH2 424 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 FBXO27Q8NI29 283 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 GPR119Q8TDV5 335 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 OSTF1Q92882 214 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 SORT1Q99523 831 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 ARMC7Q9H6L4 198 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 RMND5AQ9H871 391 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 CALML5Q9NZT1 146 aa10.25□□□□□ -0.77
CCM2-213ENST00000480658 MARCOQ9UEW3 520 aaPredicted RBP10.25□□□□□ -0.77
CCM2-213ENST00000480658 H0YC42 278 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 KLF11O14901 512 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 ITM2AO43736 263 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 UGT2B17O75795 530 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 AQP8O94778 261 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 NTN1O95631 604 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 PGRP06401 933 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 FESP07332 822 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 YES1P07947 543 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 SFTPDP35247 375 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 TPD52P55327 224 aaPredicted RBP10.24□□□□□ -0.77
CCM2-213ENST00000480658 SKP2Q13309 424 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 CASP8Q14790 479 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 QPRTQ15274 297 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 GPR68Q15743 365 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 CBLN3Q6UW01 205 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 GRINAQ7Z429 371 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 ZNF440Q8IYI8 595 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 CLECL1Q8IZS7 167 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 ZNF619Q8N2I2 560 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 ZNF610Q8N9Z0 462 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 OR5D16Q8NGK9 328 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 ZNF563Q8TA94 476 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 OTUB1Q96FW1 271 aaPredicted RBP10.24□□□□□ -0.77
CCM2-213ENST00000480658 PPP1R36Q96LQ0 422 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 WFIKKN1Q96NZ8 548 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 TRNT1Q96Q11 434 aaKnown RBP10.24□□□□□ -0.77
CCM2-213ENST00000480658 SLC35A5Q9BS91 424 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 KLHL4Q9C0H6 718 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 OR51I1Q9H343 314 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 TMEM185BQ9H7F4 350 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 BCO1Q9HAY6 547 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.24□□□□□ -0.77
CCM2-213ENST00000480658 AIG1Q9NVV5 245 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 FBXO34Q9NWN3 711 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 KLHL28Q9NXS3 571 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 CCDC168Q8NDH2 2452 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 FREM3P0C091 2139 aa10.24□□□□□ -0.77
CCM2-213ENST00000480658 A0A0J9YW62 118 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 SHISA8B8ZZ34 492 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 SMPD2O60906 423 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 SNNO75324 88 aaPredicted RBP10.23□□□□□ -0.77
CCM2-213ENST00000480658 UBTFL6P0CB48 400 aaPredicted RBP10.23□□□□□ -0.77
CCM2-213ENST00000480658 KLK2P20151 261 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 ENPP1P22413 925 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 PDK3Q15120 406 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 EXOC3L2Q2M3D2 409 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 TMEM176BQ3YBM2 270 aaPredicted RBP10.23□□□□□ -0.77
CCM2-213ENST00000480658 TIGD2Q4W5G0 525 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 PDCD4Q53EL6 469 aaKnown RBP10.23□□□□□ -0.77
CCM2-213ENST00000480658 GPAT3Q53EU6 434 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 SPANXN4Q5MJ08 99 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCM2-213ENST00000480658 PRSS57Q6UWY2 283 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 ARFGAP2Q8N6H7 521 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 ANKRD42Q8N9B4 389 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 FAM71CQ8NEG0 241 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 POC1BQ8TC44 478 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 PIWIL2Q8TC59 973 aaKnown RBP10.23□□□□□ -0.77
CCM2-213ENST00000480658 XAGE5Q8WWM1 108 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 HSD17B8Q92506 261 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 ROPN1LQ96C74 230 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 OR52E6Q96RD3 313 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 CCL19Q99731 98 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 TMUB1Q9BVT8 246 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 ACTR6Q9GZN1 396 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 SAP130Q9H0E3 1048 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 RAD21L1Q9H4I0 556 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 ESRP2Q9H6T0 727 aaKnown RBP10.23□□□□□ -0.77
CCM2-213ENST00000480658 MANSC1Q9H8J5 431 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 ZIM2Q9NZV7 527 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 MKLN1Q9UL63 735 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 HDGFL3Q9Y3E1 203 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 POLQO75417 2590 aa10.23□□□□□ -0.77
CCM2-213ENST00000480658 ZNF724A8MTY0 619 aa10.22□□□□□ -0.77
CCM2-213ENST00000480658 FAAHO00519 579 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms