RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ELK4P28324 431 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 AQP1P29972 269 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 QPRTQ15274 297 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 C3AR1Q16581 482 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 GXYLT1Q4G148 440 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 EMC4Q5J8M3 183 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 DCST1Q5T197 706 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 C16orf89Q6UX73 402 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 DOLPP1Q86YN1 238 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 ARMC8Q8IUR7 673 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 MICU2Q8IYU8 434 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 EID3Q8N140 333 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 TMEM234Q8WY98 164 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 PINK1Q9BXM7 581 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 TP63Q9H3D4 680 aaPredicted RBP17.85■□□□□ 0.45
LIME1-205ENST00000480139 PNPLA3Q9NST1 481 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 RLIMQ9NVW2 624 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 AP4B1Q9Y6B7 739 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 CFAP73A6NFT4 308 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 FIGNL2A6NMB9 653 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 ADAM11O75078 769 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 HOXD4P09016 255 aaPredicted RBP17.84■□□□□ 0.45
LIME1-205ENST00000480139 PEPDP12955 493 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 GABRA1P14867 456 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 UQCRBP14927 111 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 ZNF708P17019 499 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 PTGER4P35408 488 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 GSK3BP49841 420 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 LHX2P50458 406 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 EPS8Q12929 822 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 FOXF1Q12946 379 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 TOMM34Q15785 309 aaPredicted RBP17.84■□□□□ 0.45
LIME1-205ENST00000480139 SPATS1Q496A3 300 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 C4orf17Q53FE4 359 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 ZNF550Q7Z398 422 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 CLIP4Q8N3C7 705 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 FBXO27Q8NI29 283 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 POC1BQ8TC44 478 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 RASSF5Q8WWW0 418 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 WDYHV1Q96HA8 205 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 RSPO3Q9BXY4 272 aaPredicted RBP17.84■□□□□ 0.45
LIME1-205ENST00000480139 ACER3Q9NUN7 267 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 STOML1Q9UBI4 398 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 TNFRSF10DQ9UBN6 386 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 TINAGQ9UJW2 476 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 USP22Q9UPT9 525 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 ZNF337Q9Y3M9 751 aa17.84■□□□□ 0.45
LIME1-205ENST00000480139 HIVEP3Q5T1R4 2406 aa17.83■□□□□ 0.45
LIME1-205ENST00000480139 RELNP78509 3460 aa17.83■□□□□ 0.45
LIME1-205ENST00000480139 FLNCQ14315 2725 aa17.83■□□□□ 0.45
LIME1-205ENST00000480139 TRGV8A0A0C4DH27 118 aa17.83■□□□□ 0.44
LIME1-205ENST00000480139 M0QX08 132 aa17.83■□□□□ 0.44
LIME1-205ENST00000480139 SYT5O00445 386 aa17.83■□□□□ 0.44
LIME1-205ENST00000480139 C8BP07358 591 aa17.83■□□□□ 0.44
LIME1-205ENST00000480139 T-ENOLP0DO92 83 aa17.83■□□□□ 0.44
LIME1-205ENST00000480139 POU3F2P20265 443 aaPredicted RBP17.83■□□□□ 0.44
LIME1-205ENST00000480139 TCEA1P23193 301 aaKnown RBP17.83■□□□□ 0.44
LIME1-205ENST00000480139 CPOXP36551 454 aa17.83■□□□□ 0.44
LIME1-205ENST00000480139 CLDN18P56856 261 aa17.83■□□□□ 0.44
LIME1-205ENST00000480139 DMTNQ08495 405 aa17.83■□□□□ 0.44
LIME1-205ENST00000480139 SF3B4Q15427 424 aaKnown RBP eCLIP17.83■□□□□ 0.447e-24■■■■□ 26
LIME1-205ENST00000480139 C1QL3Q5VWW1 255 aa17.83■□□□□ 0.44
LIME1-205ENST00000480139 TNIP2Q8NFZ5 429 aa17.83■□□□□ 0.44
LIME1-205ENST00000480139 RNF145Q96MT1 663 aa17.83■□□□□ 0.44
LIME1-205ENST00000480139 GCN1Q92616 2671 aaKnown RBP17.83■□□□□ 0.44
LIME1-205ENST00000480139 AHRRA9YTQ3 701 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 SHISA8B8ZZ34 492 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 E9PLN8 166 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 EPPINO95925 133 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 IFNA14P01570 189 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 ACVR2AP27037 513 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 RYKP34925 604 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 ACAA2P42765 397 aaKnown RBP17.82■□□□□ 0.44
LIME1-205ENST00000480139 KCNJ5P48544 419 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 CRYBA2P53672 197 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 SESN3P58005 492 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 RAC1P63000 192 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 MXRA7P84157 204 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 SLC25A3Q00325 362 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 ULK2Q8IYT8 1036 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 OR5M9Q8NGP3 310 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 OR5M1Q8NGP8 315 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 ZNF563Q8TA94 476 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 TAMM41Q96BW9 452 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 ZNF524Q96C55 264 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 NPAS1Q99742 590 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 KCTD14Q9BQ13 255 aaPredicted RBP17.82■□□□□ 0.44
LIME1-205ENST00000480139 VKORC1Q9BQB6 163 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 C1orf21Q9H246 121 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 KLHL28Q9NXS3 571 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 ADA2Q9NZK5 511 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 SLC5A6Q9Y289 635 aa17.82■□□□□ 0.44
LIME1-205ENST00000480139 CLEC18AA5D8T8 446 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 B2RBV5 119 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 H3BML4 177 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 AP3D1O14617 1153 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 TPST1O60507 370 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 HTR3AP46098 478 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 IDH2P48735 452 aaKnown RBP17.81■□□□□ 0.44
LIME1-205ENST00000480139 KCNC4Q03721 635 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms