RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 OR6K3Q8NGY3 331 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 OR2V1Q8NHB1 315 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 PSMA8Q8TAA3 256 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 PHOSPHO1Q8TCT1 267 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 SFXN5Q8TD22 340 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 ADAMTS15Q8TE58 950 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 MOAP1Q96BY2 351 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 COQ8BQ96D53 544 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 PIK3IP1Q96FE7 263 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 GMPPAQ96IJ6 420 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-218ENST00000479554 PPP1R36Q96LQ0 422 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 BHLHE41Q9C0J9 482 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-218ENST00000479554 LRMDAQ9H2I8 198 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 TAGLN3Q9UI15 199 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 CLEC4AQ9UMR7 237 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 CAPN7Q9Y6W3 813 aa12.85□□□□□ -0.35
ATG4B-218ENST00000479554 NIPBLQ6KC79 2804 aaeCLIP12.85□□□□□ -0.35
ATG4B-218ENST00000479554 FLNAP21333 2647 aaKnown RBP12.85□□□□□ -0.35
ATG4B-218ENST00000479554 NPIPA5A0A0B4J1W7 369 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 DEFB108AA8MXU0 73 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 NPIPA7E9PJI5 369 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 H3BNH8 94 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 TNFSF11O14788 317 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 SIAH2O43255 324 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 CXCL13O43927 109 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 SS18L1O75177 396 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-218ENST00000479554 SOX30O94993 753 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 NUDT14O95848 222 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 OPN1LWP04000 364 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 NPIPA8P0DM63 369 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 CD53P19397 219 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 CRYGSP22914 178 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 PSMA4P25789 261 aaKnown RBP12.84□□□□□ -0.35
ATG4B-218ENST00000479554 PRDX6P30041 224 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 SOAT1P35610 550 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 EIF1P41567 113 aaKnown RBP12.84□□□□□ -0.35
ATG4B-218ENST00000479554 ZNF117Q03924 483 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 FOXF1Q12946 379 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 EXOC3L2Q2M3D2 409 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 CTU2Q2VPK5 515 aaKnown RBP12.84□□□□□ -0.35
ATG4B-218ENST00000479554 HBMQ6B0K9 141 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 ASRGL1Q7L266 308 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 TREML1Q86YW5 311 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 OR5AK3PQ8NH89 298 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 POC1BQ8TC44 478 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 NUDT8Q8WV74 236 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 KLHDC3Q9BQ90 382 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 DUSP26Q9BV47 211 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 KLHL4Q9C0H6 718 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 HOXD1Q9GZZ0 328 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 GPATCH2Q9NW75 528 aa12.84□□□□□ -0.35
ATG4B-218ENST00000479554 BEX4Q9NWD9 120 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-218ENST00000479554 A0A0J9YW62 118 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 ADAMDEC1O15204 470 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 LINGO3P0C6S8 592 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 G6PDP11413 515 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 ELK4P28324 431 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 SFTPDP35247 375 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 RNF144AP50876 292 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-218ENST00000479554 MNAT1P51948 309 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 IRX1P78414 480 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-218ENST00000479554 KLF10Q13118 480 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 BHLHB9Q6PI77 547 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 RIMKLAQ8IXN7 391 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 ZNF614Q8N883 585 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 CMTM5Q96DZ9 223 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 ZC3HAV1LQ96H79 300 aaKnown RBP12.83□□□□□ -0.36
ATG4B-218ENST00000479554 KLHL15Q96M94 604 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 ZNF385DQ9H6B1 395 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 PLSCR4Q9NRQ2 329 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 GLRX2Q9NS18 164 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 ASIC5Q9NY37 505 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 NOP53Q9NZM5 478 aaKnown RBP12.83□□□□□ -0.36
ATG4B-218ENST00000479554 CARD8Q9Y2G2 431 aa12.83□□□□□ -0.36
ATG4B-218ENST00000479554 H0YHG0 523 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 GTPBP1O00178 669 aaKnown RBP12.82□□□□□ -0.36
ATG4B-218ENST00000479554 OIP5O43482 229 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 NQO1P15559 274 aaKnown RBP12.82□□□□□ -0.36
ATG4B-218ENST00000479554 P2RX1P51575 399 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 ATP12AP54707 1039 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 SUMO3P55854 103 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-218ENST00000479554 C21orf58P58505 322 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 HBA1P69905 142 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 EMX2Q04743 252 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 PGS1Q32NB8 556 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 KLHL26Q53HC5 615 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.82□□□□□ -0.36
ATG4B-218ENST00000479554 ANKRD34AQ69YU3 496 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 CBLN3Q6UW01 205 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 STK32CQ86UX6 486 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 LILRA2Q8N149 483 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 TMCO5AQ8N6Q1 288 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 WFDC11Q8NEX6 87 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 OR5D16Q8NGK9 328 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 OSTF1Q92882 214 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 SLC7A6OSQ96CW6 309 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-218ENST00000479554 RAB3IPQ96QF0 476 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-218ENST00000479554 OR7D2Q96RA2 312 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 UBTD1Q9HAC8 227 aa12.82□□□□□ -0.36
ATG4B-218ENST00000479554 FANCFQ9NPI8 374 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms