RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 RUFY3Q7L099 469 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 PRSS48Q7RTY5 328 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 HSD11B1LQ7Z5J1 315 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 TSEN54Q7Z6J9 526 aaKnown RBP6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 ECHDC2Q86YB7 292 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 LINC01561Q8N1V8 128 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 C11orf52Q96A22 123 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 ST6GALNAC5Q9BVH7 336 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 LRRN3Q9H3W5 708 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 MCCC2Q9HCC0 563 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 MRPL39Q9NYK5 338 aaKnown RBP6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 THEGQ9P2T0 379 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 PISDQ9UG56 409 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 PSME2Q9UL46 239 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 DHRS7Q9Y394 339 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 UBN2Q6ZU65 1347 aa6.16□□□□□ -1.42
GAPVD1-217ENST00000479511 A0A075B6Q4 140 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 GOLGA6L7A0A1B0GV03 622 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 OR2AG2A6NM03 316 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 LRRTM2O43300 516 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 CA1P00915 261 aaPredicted RBP6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 JCHAINP01591 159 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 IGKV2-30P06310 120 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 OR9G9P0C7N8 305 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 POU2F1P14859 743 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 AOC1P19801 751 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 PGCP20142 388 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 TIMP3P35625 211 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 P2RY1P47900 373 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 AP3M2P53677 418 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 NTHL1P78549 312 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 IL9RQ01113 521 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 OC90Q02509 493 aaPredicted RBP6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 CTSL3PQ5NE16 218 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 CCDC71Q8IV32 467 aaPredicted RBP6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 CCDC148Q8NFR7 591 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 OR1L4Q8NGR5 311 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 TADA1Q96BN2 335 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 C7orf34Q96L11 122 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 RPRD1AQ96P16 312 aaPredicted RBP6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 SLC6A7Q99884 636 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 SLC30A2Q9BRI3 323 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 SLC39A3Q9BRY0 314 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 HIPK2Q9H2X6 1198 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 LIME1Q9H400 295 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 POLE4Q9NR33 117 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 SIGLEC8Q9NYZ4 499 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 TRMT112Q9UI30 125 aaKnown RBP6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 CYTH4Q9UIA0 394 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 ZNF639Q9UID6 485 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 KIAA1257Q9ULG3 409 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 POLDIP2Q9Y2S7 368 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 TIMM10BQ9Y5J6 103 aa6.15□□□□□ -1.42
GAPVD1-217ENST00000479511 PHLPP2Q6ZVD8 1323 aa6.15□□□□□ -1.43
GAPVD1-217ENST00000479511 SH3TC1Q8TE82 1336 aa6.15□□□□□ -1.43
GAPVD1-217ENST00000479511 ANKRD36CQ5JPF3 1778 aa6.15□□□□□ -1.43
GAPVD1-217ENST00000479511 CEP290O15078 2479 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 LRP5LA4QPB2 252 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 HHLA1C9JL84 531 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 BBOX1O75936 387 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 TSPAN12O95859 305 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 AGTP01019 485 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 CYP2B6P20813 491 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 RPL4P36578 427 aaKnown RBP6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 STK19P49842 368 aaPredicted RBP6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 NOVA1P51513 510 aaKnown RBP6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 NDST2P52849 883 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 ERVFC1-1P60608 527 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 RPS8P62241 208 aaKnown RBP6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 RPS6P62753 249 aaKnown RBP6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 ENPEPQ07075 957 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 EIF2B1Q14232 305 aaKnown RBP6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 RAB35Q15286 201 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 CYBRD1Q53TN4 286 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 OR2A2Q6IF42 318 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 DOK6Q6PKX4 331 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 UQCC3Q6UW78 93 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 COPS6Q7L5N1 327 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 DHDDSQ86SQ9 333 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 OR5L2Q8NGL0 311 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 OR10G7Q8NGN6 311 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 C11orf45Q8TAV5 145 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 BADQ92934 168 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 DNAJA3Q96EY1 480 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 MMP28Q9H239 520 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 ESM1Q9NQ30 184 aa6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 EXOGQ9Y2C4 368 aaKnown RBP6.14□□□□□ -1.43
GAPVD1-217ENST00000479511 IQCMA0A1B0GVH7 501 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 FAM172BPA6NC97 362 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 IGLON5A6NGN9 336 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 PMS2P5A8MQ11 134 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 BLOC1S5-TXNDC5H3BN57 136 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 ABCD4O14678 606 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 FRAT2O75474 233 aaPredicted RBP6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 UPK3AO75631 287 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 SCGNO76038 276 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 SORBS2O94875 1100 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 NDUFB10O96000 172 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 PDHA2P29803 388 aa6.13□□□□□ -1.43
GAPVD1-217ENST00000479511 CAPGP40121 348 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms