RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 OR10A4Q9H209 315 aa13.4□□□□□ -0.26
COL20A1-206ENST00000479501 KLHL21Q9UJP4 597 aa13.4□□□□□ -0.26
COL20A1-206ENST00000479501 C17orf105B2RV13 164 aa13.4□□□□□ -0.27
COL20A1-206ENST00000479501 LRRTM2O43300 516 aa13.4□□□□□ -0.27
COL20A1-206ENST00000479501 ADH7P40394 386 aa13.4□□□□□ -0.27
COL20A1-206ENST00000479501 DEFB133Q30KQ1 61 aa13.4□□□□□ -0.27
COL20A1-206ENST00000479501 SYT6Q5T7P8 510 aaPredicted RBP13.4□□□□□ -0.27
COL20A1-206ENST00000479501 LEG1Q6P5S2 330 aa13.4□□□□□ -0.27
COL20A1-206ENST00000479501 OLIG3Q7RTU3 272 aa13.4□□□□□ -0.27
COL20A1-206ENST00000479501 MMP21Q8N119 569 aa13.4□□□□□ -0.27
COL20A1-206ENST00000479501 ZMYND19Q96E35 227 aaPredicted RBP13.4□□□□□ -0.27
COL20A1-206ENST00000479501 ANKRD28O15084 1053 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 CDC40O60508 579 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL20A1-206ENST00000479501 CYB5AP00167 134 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 NR2C1P13056 603 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 CFL1P23528 166 aaKnown RBP13.39□□□□□ -0.27
COL20A1-206ENST00000479501 PRPH2P23942 346 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 CASP3P42574 277 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 MLLT11Q13015 90 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-206ENST00000479501 MRPL2Q5T653 305 aaKnown RBP13.39□□□□□ -0.27
COL20A1-206ENST00000479501 BEST3Q8N1M1 668 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 OR1E3Q8WZA6 343 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 MRPL38Q96DV4 380 aaKnown RBP13.39□□□□□ -0.27
COL20A1-206ENST00000479501 DEFB126Q9BYW3 111 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 LTB4R2Q9NPC1 389 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-206ENST00000479501 IER3IP1Q9Y5U9 82 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 ZNF878C9JN71 531 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 GABARAPO95166 117 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 S1PR1P21453 382 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 SLC6A9P48067 706 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 RAB5BP61020 215 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 SLC35A2P78381 396 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 GPR18Q14330 331 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 OR1Q1Q15612 314 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 OR5T3Q8NGG3 340 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 ELP4Q96EB1 424 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 MBOAT4Q96T53 435 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 CHMP1AQ9HD42 196 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-206ENST00000479501 TMPRSS11DO60235 418 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 SCGB1D2O95969 90 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 MSL3P1P0C860 447 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 ACP2P11117 423 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 RAB3BP20337 219 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 MAPK14Q16539 360 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 TATDN3Q17R31 274 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 GALNT11Q8NCW6 608 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 ADAMTS19Q8TE59 1207 aa13.39□□□□□ -0.27
COL20A1-206ENST00000479501 SPRYD4Q8WW59 207 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-206ENST00000479501 A0A1B0GVI7 797 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 SYT5O00445 386 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 TSFMP43897 325 aaKnown RBP13.38□□□□□ -0.27
COL20A1-206ENST00000479501 OCLNQ16625 522 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 CTU2Q2VPK5 515 aaKnown RBP13.38□□□□□ -0.27
COL20A1-206ENST00000479501 PYCR3Q53H96 274 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 OR2G6Q5TZ20 316 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 BAIAP2L2Q6UXY1 529 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 PTOV1Q86YD1 416 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 FAM109AQ8N4B1 249 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 OR7G1Q8NGA0 311 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 YARS2Q9Y2Z4 477 aaKnown RBP13.38□□□□□ -0.27
COL20A1-206ENST00000479501 PCDHGA6Q9Y5G7 932 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 TEX13DA0A0J9YY54 714 aaPredicted RBP13.38□□□□□ -0.27
COL20A1-206ENST00000479501 ARHGAP33O14559 1287 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 SRPX2O60687 465 aaPredicted RBP13.38□□□□□ -0.27
COL20A1-206ENST00000479501 CD38P28907 300 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 AGTR1P30556 359 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 NR0B1P51843 470 aaKnown RBP13.38□□□□□ -0.27
COL20A1-206ENST00000479501 STEAP3Q658P3 488 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 TMEM225Q6GV28 225 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 PYHIN1Q6K0P9 492 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 SYT14Q8NB59 555 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 OR4F15Q8NGB8 312 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 KIR3DX1Q9H7L2 352 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 RLIMQ9NVW2 624 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 NDRG4Q9ULP0 352 aaKnown RBP13.38□□□□□ -0.27
COL20A1-206ENST00000479501 KLK4Q9Y5K2 254 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 MAOBP27338 520 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 CD6P30203 668 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 ADPRHP54922 357 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 PRPS1P60891 318 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 PDE7AQ13946 482 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 SHHQ15465 462 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 SLC46A3Q7Z3Q1 461 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 GPAT4Q86UL3 456 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 NLRP8Q86W28 1048 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 SLC16A11Q8NCK7 471 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 SGCDQ92629 289 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 RANGRFQ9HD47 186 aaPredicted RBP13.38□□□□□ -0.27
COL20A1-206ENST00000479501 ACER3Q9NUN7 267 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 TAS2R16Q9NYV7 291 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 ABI3Q9P2A4 366 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 CACNA1CQ13936 2221 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 POM121BA6NF01 834 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 ARPC5O15511 151 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 MAMDC2Q7Z304 686 aaPredicted RBP13.38□□□□□ -0.27
COL20A1-206ENST00000479501 TMPRSS12Q86WS5 348 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 MS4A6EQ96DS6 147 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 LINC00615Q96LM1 132 aaPredicted RBP13.38□□□□□ -0.27
COL20A1-206ENST00000479501 SNX18Q96RF0 628 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms