RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 CLDN4O14493 209 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 CH25HO95992 272 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 POU4F2Q12837 409 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 ZAR1Q86SH2 424 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 ZNF440Q8IYI8 595 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 ACBD7Q8N6N7 88 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 SIRT6Q8N6T7 355 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 GDPD1Q8N9F7 314 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 IRF2BPLQ9H1B7 796 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 POLE4Q9NR33 117 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 STARD5Q9NSY2 213 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 CA14Q9ULX7 337 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 CSNK1G3Q9Y6M4 447 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 TTC28Q96AY4 2481 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 A0A1B0GWA3 101 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 SLC2A10O95528 541 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 IGKV1D-16P01601 117 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 APOA1P02647 267 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 PROS1P07225 676 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 IMPDH2P12268 514 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 TYRP1P17643 537 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 ADH7P40394 386 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 ATP12AP54707 1039 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 SLC13A2Q13183 592 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 FHL1Q13642 323 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 RIN1Q13671 783 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 SERTAD2Q14140 314 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 GALEQ14376 348 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 ZNF79Q15937 498 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 CRTC2Q53ET0 693 aaPredicted RBP11.27□□□□□ -0.61
PTPRF-212ENST00000477970 ZNF542PQ5EBM4 170 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 PDZK1Q5T2W1 519 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 VASNQ6EMK4 673 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 OGFOD3Q6PK18 319 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 SHISA5Q8N114 240 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 TSTD1Q8NFU3 115 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 OR7G1Q8NGA0 311 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 CNOT9Q92600 299 aaKnown RBP11.27□□□□□ -0.61
PTPRF-212ENST00000477970 C1GALT1C1Q96EU7 318 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 SECISBP2Q96T21 854 aaKnown RBP11.27□□□□□ -0.61
PTPRF-212ENST00000477970 MIXL1Q9H2W2 232 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 Q9N2J8 555 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 PRTFDC1Q9NRG1 225 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 ICAM5Q9UMF0 924 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 GRIP1Q9Y3R0 1128 aa11.27□□□□□ -0.61
PTPRF-212ENST00000477970 NUP210LQ5VU65 1888 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 METTL12A8MUP2 240 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 SOCS6O14544 535 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 LALBAP00709 142 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 PAICSP22234 425 aaKnown RBP11.26□□□□□ -0.61
PTPRF-212ENST00000477970 PPP3R1P63098 170 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 HNRNPA0Q13151 305 aaKnown RBP11.26□□□□□ -0.61
PTPRF-212ENST00000477970 ISXQ2M1V0 245 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 DDI2Q5TDH0 399 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 ARHGAP11AQ6P4F7 1023 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 ULK3Q6PHR2 472 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 NPSR1Q6W5P4 371 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 GDPD3Q7L5L3 318 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 SPRYD4Q8WW59 207 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-212ENST00000477970 RBM18Q96H35 190 aaKnown RBP11.26□□□□□ -0.61
PTPRF-212ENST00000477970 DGAT2Q96PD7 388 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 TIMP4Q99727 224 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 SOSTQ9BQB4 213 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 ATP13A2Q9NQ11 1180 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 TBC1D24Q9ULP9 559 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 A0A0A6YYC8 382 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-212ENST00000477970 NPIPA5A0A0B4J1W7 369 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 TLCD2A6NGC4 264 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 NPIPA7E9PJI5 369 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 I3L1I5 382 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-212ENST00000477970 GALR2O43603 387 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-212ENST00000477970 NPIPA8P0DM63 369 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 SDC2P34741 201 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 CD79BP40259 229 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 STX4Q12846 297 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 C1orf61Q13536 156 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 ZNF362Q5T0B9 420 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-212ENST00000477970 RTL4Q6ZR62 310 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 LHFPL3Q86UP9 236 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 LAX1Q8IWV1 398 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 GPALPP1Q8IXQ4 340 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 TMEM105Q8N8V8 129 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 AHCYL2Q96HN2 611 aaKnown RBP11.26□□□□□ -0.61
PTPRF-212ENST00000477970 SLC19A3Q9BZV2 496 aa11.26□□□□□ -0.61
PTPRF-212ENST00000477970 NDRG2Q9UN36 371 aaKnown RBP11.26□□□□□ -0.61
PTPRF-212ENST00000477970 PRR23D1E9PI22 279 aaPredicted RBP11.25□□□□□ -0.61
PTPRF-212ENST00000477970 PDGFBP01127 241 aaPredicted RBP11.25□□□□□ -0.61
PTPRF-212ENST00000477970 CLPSP04118 112 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 WNT1P04628 370 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 CTSBP07858 339 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 PRR23D2P0DMB1 279 aaPredicted RBP11.25□□□□□ -0.61
PTPRF-212ENST00000477970 CD38P28907 300 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 SLC6A6P31641 620 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 GPR143P51810 404 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 MAZP56270 477 aaKnown RBP11.25□□□□□ -0.61
PTPRF-212ENST00000477970 TAS2R43P59537 309 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 ACTC1P68032 377 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 ACTA1P68133 377 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 PLBD1Q6P4A8 553 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 ZNF761Q86XN6 746 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms