RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 MAB21L1Q13394 359 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 MPEG1Q2M385 716 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 TBC1D25Q3MII6 688 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 ARHGAP11AQ6P4F7 1023 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 PAMR1Q6UXH9 720 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 SYT9Q86SS6 491 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 TANKQ92844 425 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 CCDC32Q9BV29 185 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 GTPBP2Q9BX10 602 aaKnown RBP10.26□□□□□ -0.77
COL27A1-204ENST00000477421 NUDT15Q9NV35 164 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 NFKBIL1Q9UBC1 381 aaPredicted RBP10.26□□□□□ -0.77
COL27A1-204ENST00000477421 B3GNT3Q9Y2A9 372 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.26□□□□□ -0.77
COL27A1-204ENST00000477421 ENTPD2Q9Y5L3 495 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 DNAJC13O75165 2243 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 A0A1B0GWA3 101 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 MEIOCA2RUB1 952 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 M0R082 166 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 LRRTM2O43300 516 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 AQP9O43315 295 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 LYRM1O43325 122 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 IFNA6P05013 189 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 SOX18P35713 384 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 EIF2DP41214 584 aaKnown RBP10.26□□□□□ -0.77
COL27A1-204ENST00000477421 MRPL19P49406 292 aaKnown RBP10.26□□□□□ -0.77
COL27A1-204ENST00000477421 EMP3P54852 163 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 TAS2R43P59537 309 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 HTRA4P83105 476 aaPredicted RBP10.26□□□□□ -0.77
COL27A1-204ENST00000477421 MLF2Q15773 248 aaPredicted RBP10.26□□□□□ -0.77
COL27A1-204ENST00000477421 BTBD16Q32M84 506 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 SCGB2B2Q4G0G5 96 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 NKAIN2Q5VXU1 208 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 ZNF613Q6PF04 617 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 PRSS41Q7RTY9 318 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 ZFPM2Q8WW38 1151 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 ASB15Q8WXK1 588 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 GABARAPL1Q9H0R8 117 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 TCEAL2Q9H3H9 227 aaPredicted RBP10.26□□□□□ -0.77
COL27A1-204ENST00000477421 ERVK-11Q9UQG0 969 aa10.26□□□□□ -0.77
COL27A1-204ENST00000477421 FMO6PO60774 539 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 KRT33AO76009 404 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 FAUP35544 74 aaKnown RBP10.25□□□□□ -0.77
COL27A1-204ENST00000477421 GRM7Q14831 915 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 RASGRP3Q8IV61 690 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 ETFBKMTQ8IXQ9 262 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 SFXN5Q8TD22 340 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 SDF2Q99470 211 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 C19orf43Q9BQ61 176 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 PLEKHA1Q9HB21 404 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 HINT3Q9NQE9 182 aaKnown RBP10.25□□□□□ -0.77
COL27A1-204ENST00000477421 GPATCH2Q9NW75 528 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 SCML1Q9UN30 329 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 VDAC3Q9Y277 283 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 MGAMO43451 1857 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 H3BML4 177 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 PRAMEF2O60811 474 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 PAPLNO95428 1278 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 PEPDP12955 493 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 PTPN6P29350 595 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 ZMAT1Q5H9K5 638 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 FAM180AQ6UWF9 173 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 OR6C4Q8NGE1 309 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 YIPF6Q96EC8 236 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 LINC00615Q96LM1 132 aaPredicted RBP10.25□□□□□ -0.77
COL27A1-204ENST00000477421 NMNAT3Q96T66 252 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 RXFP3Q9NSD7 469 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 COMMD9Q9P000 198 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 ZNF69Q9UC07 566 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 GPN3Q9UHW5 284 aaPredicted RBP10.25□□□□□ -0.77
COL27A1-204ENST00000477421 CACNA1GO43497 2377 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 MYO16Q9Y6X6 1858 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 HYKKA2RU49 373 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 ACOD1A6NK06 481 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 DOK2O60496 412 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 AK1P00568 194 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 ST6GAL1P15907 406 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 PITPNAQ00169 270 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 ALKBH2Q6NS38 261 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 RASSF6Q6ZTQ3 369 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 MEPCEQ7L2J0 689 aaKnown RBP10.25□□□□□ -0.77
COL27A1-204ENST00000477421 ATCAYQ86WG3 371 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 DNAJC5GQ8N7S2 189 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 S100A16Q96FQ6 103 aaKnown RBP10.25□□□□□ -0.77
COL27A1-204ENST00000477421 PIGUQ9H490 435 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 WASH6PQ9NQA3 447 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 DIABLOQ9NR28 239 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 FARSAQ9Y285 508 aaKnown RBP10.25□□□□□ -0.77
COL27A1-204ENST00000477421 SDK2Q58EX2 2172 aa10.25□□□□□ -0.77
COL27A1-204ENST00000477421 PDCD5O14737 125 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 POLR1CO15160 346 aaPredicted RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 SLC6A9P48067 706 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 AP3S2P59780 193 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ADAM8P78325 824 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 RUNX2Q13950 521 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 OXA1LQ15070 435 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 TMEM184AQ6ZMB5 413 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 NLRP8Q86W28 1048 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ARL14Q8N4G2 192 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ASCC1Q8N9N2 400 aaKnown RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ZNF511Q8NB15 262 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms