RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 CCDC85BQ15834 202 aaPredicted RBP10.59□□□□□ -0.71
NUP188-205ENST00000477069 C1QTNF12Q5T7M4 302 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 PLBD1Q6P4A8 553 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 BMP8AQ7Z5Y6 402 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 SLC22A16Q86VW1 577 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 ARIH2OSQ8N7S6 290 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 WDFY2Q96P53 400 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 PHOX2BQ99453 314 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 G6PC3Q9BUM1 346 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 MIR1-1HGQ9H1L0 117 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 MCCC2Q9HCC0 563 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 Q9N2J8 555 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 POLE4Q9NR33 117 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 SOHLH2Q9NX45 425 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 CRNNQ9UBG3 495 aaPredicted RBP10.59□□□□□ -0.71
NUP188-205ENST00000477069 TBX1O43435 398 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 SDC3O75056 442 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 PIAS2O75928 621 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 GAAP10253 952 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 FABP5Q01469 135 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 C22orf42Q6IC83 251 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 KIRREL2Q6UWL6 708 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 MEPCEQ7L2J0 689 aaKnown RBP10.59□□□□□ -0.71
NUP188-205ENST00000477069 ASB15Q8WXK1 588 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 PTP4A1Q93096 173 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 TMEM203Q969S6 136 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 SP140LQ9H930 580 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 ABCB10Q9NRK6 738 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 SNTG1Q9NSN8 517 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 LRIT1Q9P2V4 623 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 PCDHGB6Q9Y5F9 930 aa10.59□□□□□ -0.71
NUP188-205ENST00000477069 TRAV27A0A087WT01 109 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 IL9P15248 144 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 BMP7P18075 431 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 BCKDHBP21953 392 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 TNFSF8P32971 234 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 TGM4P49221 684 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 PSMD4P55036 377 aaKnown RBP10.58□□□□□ -0.72
NUP188-205ENST00000477069 PSPHP78330 225 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 CFHR1Q03591 330 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 KCNAB1Q14722 419 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 GRM7Q14831 915 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 ALG10BQ5I7T1 473 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 ARMC4Q5T2S8 1044 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 ZNF550Q7Z398 422 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 CDK20Q8IZL9 346 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 KLHL36Q8N4N3 616 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 ZNF614Q8N883 585 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 FAM71CQ8NEG0 241 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 PELOQ9BRX2 385 aaKnown RBP10.58□□□□□ -0.72
NUP188-205ENST00000477069 MED20Q9H944 212 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 WNT16Q9UBV4 365 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 PLEKHB1Q9UF11 243 aaPredicted RBP10.58□□□□□ -0.72
NUP188-205ENST00000477069 TRAPPC4Q9Y296 219 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 V9GYH0 126 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 ZC3H12DA2A288 527 aaKnown RBP10.58□□□□□ -0.72
NUP188-205ENST00000477069 HCN1O60741 890 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 CDRT1O95170 752 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 HNRNPCP07910 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
NUP188-205ENST00000477069 GTF2E2P29084 291 aaKnown RBP10.58□□□□□ -0.72
NUP188-205ENST00000477069 SERTAD2Q14140 314 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 NNATQ16517 81 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 FNDC7Q5VTL7 733 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 AGAP7PQ5VUJ5 663 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 ZNF322Q6U7Q0 402 aaPredicted RBP10.58□□□□□ -0.72
NUP188-205ENST00000477069 SLC43A2Q8N370 569 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 GALNT6Q8NCL4 622 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 OR4C3Q8NH37 302 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 PTPMT1Q8WUK0 201 aaPredicted RBP10.58□□□□□ -0.72
NUP188-205ENST00000477069 SPRYD4Q8WW59 207 aaPredicted RBP10.58□□□□□ -0.72
NUP188-205ENST00000477069 DNASE2BQ8WZ79 361 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 ZDHHC12Q96GR4 267 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 DCLRE1CQ96SD1 692 aaKnown RBP10.58□□□□□ -0.72
NUP188-205ENST00000477069 SECISBP2Q96T21 854 aaKnown RBP10.58□□□□□ -0.72
NUP188-205ENST00000477069 TM9SF2Q99805 663 aa10.58□□□□□ -0.72
NUP188-205ENST00000477069 IGKV3D-11A0A0A0MRZ8 115 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 PNMA8CA0A1B0GUJ8 204 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 TRDV1A0A1B0GX56 115 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 SERINC4A6NH21 518 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 SAGP10523 405 aaPredicted RBP10.57□□□□□ -0.72
NUP188-205ENST00000477069 PGDP52209 483 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 BIKQ13323 160 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 NDUFAF6Q330K2 333 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 ZNF791Q3KP31 576 aaPredicted RBP10.57□□□□□ -0.72
NUP188-205ENST00000477069 KLHL26Q53HC5 615 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 ULK3Q6PHR2 472 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 CARFQ8N187 725 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 SPEM1Q8N4L4 309 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 ZFP41Q8N8Y5 198 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 OR7G1Q8NGA0 311 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 SLC30A2Q9BRI3 323 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 IFT27Q9BW83 186 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 SEMA5BQ9P283 1151 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 TNFRSF10DQ9UBN6 386 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 GMEB2Q9UKD1 530 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 BAIAP2Q9UQB8 552 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 SPTBP11277 2137 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 IGHV1OR21-1A0A087WYE8 117 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 EFCAB7A8K855 629 aa10.57□□□□□ -0.72
NUP188-205ENST00000477069 LOC110117498-PIK3R3F6TDL0 507 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms