RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SLC16A11Q8NCK7 471 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 FBXO30Q8TB52 745 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 C12orf65Q9H3J6 166 aaKnown RBP9.98□□□□□ -0.81
BRCA1-213ENST00000476777 NTMQ9P121 344 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 ICAM5Q9UMF0 924 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 WBP11Q9Y2W2 641 aaKnown RBP9.98□□□□□ -0.81
BRCA1-213ENST00000476777 ACTL7BQ9Y614 415 aa9.98□□□□□ -0.81
BRCA1-213ENST00000476777 GPC6Q9Y625 555 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-213ENST00000476777 SERTM1A2A2V5 107 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 M0R1B8 84 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 SUPT7LO94864 414 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 IGHV3-9P01782 118 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF23P17027 643 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 PRKCAP17252 672 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 SLC7A1P30825 629 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 APOBEC3AP31941 199 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-213ENST00000476777 PRKAG1P54619 331 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 DUSP5Q16690 384 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 SWI5Q1ZZU3 235 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 MST1LQ2TV78 715 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 FAM174BQ3ZCQ3 159 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF678Q5SXM1 525 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 CCNJQ5T5M9 372 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 FBXW9Q5XUX1 488 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 MTERF4Q7Z6M4 381 aaKnown RBP9.97□□□□□ -0.81
BRCA1-213ENST00000476777 CEP70Q8NHQ1 597 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 GPR119Q8TDV5 335 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 MRGPRX4Q96LA9 322 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 SORCS2Q96PQ0 1159 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 TMEM237Q96Q45 408 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 KCNA7Q96RP8 456 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 C1QTNF6Q9BXI9 259 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 ACSS3Q9H6R3 686 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 POLR3HQ9Y535 204 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-213ENST00000476777 TIMM22Q9Y584 194 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 ATP23Q9Y6H3 246 aa9.97□□□□□ -0.81
BRCA1-213ENST00000476777 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.97□□□□□ -0.81
BRCA1-213ENST00000476777 WNK2Q9Y3S1 2297 aa9.96□□□□□ -0.81
BRCA1-213ENST00000476777 LOC390937A0A1W2PQ73 354 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 CIB4A0PJX0 185 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 NUDT14O95848 222 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 ENO1P06733 434 aaKnown RBP9.96□□□□□ -0.82
BRCA1-213ENST00000476777 SERPINB4P48594 390 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 RNF144AP50876 292 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-213ENST00000476777 P2RX1P51575 399 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 SUMO3P55854 103 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-213ENST00000476777 PHC1P78364 1004 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 SELENBP1Q13228 472 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 IQCCQ4KMZ1 466 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 SPDYAQ5MJ70 313 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 EXOSC6Q5RKV6 272 aaKnown RBP9.96□□□□□ -0.82
BRCA1-213ENST00000476777 IKBIPQ70UQ0 350 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 COX18Q8N8Q8 333 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 NUP43Q8NFH3 380 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 PHOSPHO1Q8TCT1 267 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 CIDECQ96AQ7 238 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-213ENST00000476777 OTUB1Q96FW1 271 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-213ENST00000476777 C16orf58Q96GQ5 468 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 MUS81Q96NY9 551 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 MS4A4EQ96PG1 132 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 NAPGQ99747 312 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-213ENST00000476777 TRMOQ9BU70 441 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 CARD8Q9Y2G2 431 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 UTP11Q9Y3A2 253 aaKnown RBP9.96□□□□□ -0.82
BRCA1-213ENST00000476777 TRAF6Q9Y4K3 522 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 FKBP7Q9Y680 259 aa9.96□□□□□ -0.82
BRCA1-213ENST00000476777 IGKV3D-15A0A087WSY6 115 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 CCDC151A5D8V7 595 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 CCT8L1PA6NM43 557 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 ETV2O00321 342 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-213ENST00000476777 PDPK1O15530 556 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 VENTXO95231 258 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 H6PDO95479 791 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 HSPA4LO95757 839 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 ALOX5P09917 674 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 NTF4P34130 210 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 GPC1P35052 558 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 SRP14P37108 136 aaKnown RBP9.95□□□□□ -0.82
BRCA1-213ENST00000476777 COMPP49747 757 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-213ENST00000476777 FOXG1P55316 489 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-213ENST00000476777 PKNOX1P55347 436 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 GNG11P61952 73 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 LCP2Q13094 533 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 GABRA6Q16445 453 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 CARTPTQ16568 116 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 NDUFAF6Q330K2 333 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 KLHL26Q53HC5 615 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 SLC25A53Q5H9E4 307 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 ANKRD26P1Q6NSI1 321 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 UBE2J2Q8N2K1 259 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 WDR31Q8NA23 367 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 SPATA4Q8NEY3 305 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 SGMS2Q8NHU3 365 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 FAM76AQ8TAV0 307 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 ZFAND2BQ8WV99 257 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 APH1AQ96BI3 265 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 ZMYND19Q96E35 227 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-213ENST00000476777 FBXO17Q96EF6 278 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 EGLN2Q96KS0 407 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 OR5B2Q96R09 309 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms