RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 OSTF1Q92882 214 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 EMG1Q92979 244 aaKnown RBP4.3□□□□□ -1.72
SMC5-203ENST00000475540 HPDLQ96IR7 371 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 SLC39A3Q9BRY0 314 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 TM2D1Q9BX74 207 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 ERVK-6Q9BXR3 956 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 GON7Q9BXV9 100 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 CALHM2Q9HA72 323 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 APMAPQ9HDC9 416 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 GLRX2Q9NS18 164 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 ETNK2Q9NVF9 386 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 ARHGAP23Q9P227 1491 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 WDR19Q8NEZ3 1342 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 GOLGA8OA6NCC3 632 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 FAM231BA6NCW3 169 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 HELTA6NFD8 242 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 ZNF716A6NP11 495 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 GOLGA8NF8WBI6 632 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 H3BTX0 84 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 BOLA2-SMG1P6H3BVE0 249 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 L7N2F9 121 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 WWP2O00308 870 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 CLDN5O00501 218 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 MED7O43513 233 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 JAK2O60674 1132 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 ANP32DO95626 131 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 ANXA4P09525 319 aaPredicted RBP4.29□□□□□ -1.72
SMC5-203ENST00000475540 ZNF735P0CB33 412 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 EXOSC2Q13868 293 aaKnown RBP4.29□□□□□ -1.72
SMC5-203ENST00000475540 PRR4Q16378 134 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 PARP6Q2NL67 630 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 LRIT3Q3SXY7 679 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 ACSF3Q4G176 576 aaPredicted RBP4.29□□□□□ -1.72
SMC5-203ENST00000475540 SBK1Q52WX2 424 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 TTC23Q5W5X9 447 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 OTPQ5XKR4 325 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 ZNF530Q6P9A1 599 aaPredicted RBP4.29□□□□□ -1.72
SMC5-203ENST00000475540 SCARA5Q6ZMJ2 495 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 CCDC36Q8IYA8 594 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 NECAB1Q8N987 351 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 WDR36Q8NI36 951 aaKnown RBP4.29□□□□□ -1.72
SMC5-203ENST00000475540 RAET1EQ8TD07 263 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 GSDMCQ9BYG8 508 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 GPR61Q9BZJ8 451 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 GLT8D2Q9H1C3 349 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 EHD1Q9H4M9 534 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 YY1AP1Q9H869 796 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 LPAR2Q9HBW0 351 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 CRLF2Q9HC73 371 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 POLD4Q9HCU8 107 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 AGPAT5Q9NUQ2 364 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 CRLS1Q9UJA2 301 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 FZR1Q9UM11 496 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 AP4B1Q9Y6B7 739 aa4.29□□□□□ -1.72
SMC5-203ENST00000475540 OR7A17O14581 309 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 CACNG3O60359 315 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 WBP4O75554 376 aaKnown RBP4.28□□□□□ -1.72
SMC5-203ENST00000475540 TOXO94900 526 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 PGK1P00558 417 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 SERPINA3P01011 423 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 CHRNA1P02708 482 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 CAPN1P07384 714 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 CCDC130P13994 396 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 HNF1AP20823 631 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 NF2P35240 595 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 RFC2P35250 354 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 ZNF133P52736 654 aaPredicted RBP4.28□□□□□ -1.72
SMC5-203ENST00000475540 RPL32P62910 135 aaKnown RBP4.28□□□□□ -1.72
SMC5-203ENST00000475540 CKAP4Q07065 602 aaKnown RBP4.28□□□□□ -1.72
SMC5-203ENST00000475540 PLD1Q13393 1074 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 PPP1R7Q15435 360 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 SSX2Q16385 188 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 CAVIN4Q5BKX8 364 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 PHYHD1Q5SRE7 291 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 CELF3Q5SZQ8 465 aaKnown RBP4.28□□□□□ -1.72
SMC5-203ENST00000475540 SYT10Q6XYQ8 523 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 ANKFN1Q8N957 763 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 OR6C4Q8NGE1 309 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 OR8J1Q8NGP2 316 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 SPRYD4Q8WW59 207 aaPredicted RBP4.28□□□□□ -1.72
SMC5-203ENST00000475540 RASD2Q96D21 266 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 CLSTN2Q9H4D0 955 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 METTL7AQ9H8H3 244 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 GDAP2Q9NXN4 497 aa4.28□□□□□ -1.72
SMC5-203ENST00000475540 AGTP01019 485 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 IGHV3-23P01764 117 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 UQCRBP14927 111 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 PTBP1P26599 531 aaKnown RBP eCLIP4.27□□□□□ -1.73
SMC5-203ENST00000475540 CCR1P32246 355 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 RFC4P35249 363 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 SUCLG1P53597 346 aaKnown RBP4.27□□□□□ -1.73
SMC5-203ENST00000475540 SRYQ05066 204 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 ATF7IP2Q5U623 682 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 PRAMEF20Q5VT98 475 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 TMEM225Q6GV28 225 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 C16orf62Q7Z3J2 963 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 PARGQ86W56 976 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 ZNF683Q8IZ20 524 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 UBE2J2Q8N2K1 259 aa4.27□□□□□ -1.73
SMC5-203ENST00000475540 CSNK1A1LQ8N752 337 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms