RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 MKLN1Q9UL63 735 aa16.57■□□□□ 0.24
COL7A1-209ENST00000474432 DUXAA6NLW8 204 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 GTPBP1O00178 669 aaKnown RBP16.56■□□□□ 0.24
COL7A1-209ENST00000474432 KLF4O43474 513 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 STX11O75558 287 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 SYNGR4O95473 234 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 CPSF4O95639 269 aaKnown RBP16.56■□□□□ 0.24
COL7A1-209ENST00000474432 NUDT14O95848 222 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 AK1P00568 194 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 GUSBP08236 651 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 UBL4AP11441 157 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 IL12AP29459 219 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 CTBP2P56545 445 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 QPRTQ15274 297 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 GPR68Q15743 365 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 TMEM176BQ3YBM2 270 aaPredicted RBP16.56■□□□□ 0.24
COL7A1-209ENST00000474432 ZNF614Q8N883 585 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 WFDC11Q8NEX6 87 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 ABHD3Q8WU67 409 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 RAB8BQ92930 207 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 ZG16BQ96DA0 208 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 PIK3IP1Q96FE7 263 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 ZC3HAV1LQ96H79 300 aaKnown RBP16.56■□□□□ 0.24
COL7A1-209ENST00000474432 MRGPRX4Q96LA9 322 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 KLHL4Q9C0H6 718 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 LAT2Q9GZY6 243 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 SAP130Q9H0E3 1048 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 ZNF226Q9NYT6 803 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 ING1Q9UK53 422 aaPredicted RBP16.56■□□□□ 0.24
COL7A1-209ENST00000474432 ARID1AO14497 2285 aa16.56■□□□□ 0.24
COL7A1-209ENST00000474432 SNNO75324 88 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-209ENST00000474432 PLGP00747 810 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-209ENST00000474432 OR12D1P0DN82 309 aa16.55■□□□□ 0.24
COL7A1-209ENST00000474432 UQCRC2P22695 453 aa16.55■□□□□ 0.24
COL7A1-209ENST00000474432 UFM1P61960 85 aa16.55■□□□□ 0.24
COL7A1-209ENST00000474432 PDSS1Q5T2R2 415 aa16.55■□□□□ 0.24
COL7A1-209ENST00000474432 ANXA8L1Q5VT79 327 aa16.55■□□□□ 0.24
COL7A1-209ENST00000474432 TYW3Q6IPR3 259 aaKnown RBP16.55■□□□□ 0.24
COL7A1-209ENST00000474432 NUFIP2Q7Z417 695 aaKnown RBP16.55■□□□□ 0.24
COL7A1-209ENST00000474432 FAM71CQ8NEG0 241 aa16.55■□□□□ 0.24
COL7A1-209ENST00000474432 RFWD2Q8NHY2 731 aa16.55■□□□□ 0.24
COL7A1-209ENST00000474432 NEURL3Q96EH8 262 aa16.55■□□□□ 0.24
COL7A1-209ENST00000474432 THUMPD3Q9BV44 507 aaKnown RBP16.55■□□□□ 0.24
COL7A1-209ENST00000474432 AIG1Q9NVV5 245 aa16.55■□□□□ 0.24
COL7A1-209ENST00000474432 DSCAMO60469 2012 aa16.55■□□□□ 0.24
COL7A1-209ENST00000474432 TMEM120BA0PK00 339 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 C9JVG2 144 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 KIAA0513O60268 411 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 H6PDO95479 791 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 ENPP1P22413 925 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 PGM1P36871 562 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 FAM174BQ3ZCQ3 159 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 TNFAIP8L2Q6P589 184 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-209ENST00000474432 FRRS1Q6ZNA5 592 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 ANKRD42Q8N9B4 389 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 ATP6V1C2Q8NEY4 427 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 TOR1AIP2Q8NFQ8 470 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 ZFP90Q8TF47 636 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 XAGE5Q8WWM1 108 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 CPNE4Q96A23 557 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-209ENST00000474432 CCDC115Q96NT0 180 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 PAIP2Q9BPZ3 127 aaKnown RBP16.54■□□□□ 0.24
COL7A1-209ENST00000474432 QRSL1Q9H0R6 528 aaKnown RBP16.54■□□□□ 0.24
COL7A1-209ENST00000474432 WDR55Q9H6Y2 383 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-209ENST00000474432 BEX4Q9NWD9 120 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-209ENST00000474432 PCDHGB4Q9UN71 923 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 GPR45Q9Y5Y3 372 aa16.54■□□□□ 0.24
COL7A1-209ENST00000474432 A0A1W2PNR3 127 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 E9PBE3 544 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 GCM2O75603 506 aaPredicted RBP16.53■□□□□ 0.24
COL7A1-209ENST00000474432 CLNS1AP54105 237 aaKnown RBP16.53■□□□□ 0.24
COL7A1-209ENST00000474432 NME5P56597 212 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 SESN3P58005 492 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 SELENBP1Q13228 472 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 DPY19L1Q2PZI1 675 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 TIGD2Q4W5G0 525 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 CROCCP2Q86T23 111 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 LSRQ86X29 649 aaPredicted RBP16.53■□□□□ 0.24
COL7A1-209ENST00000474432 TUSC5Q8IXB3 177 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 KIRREL3Q8IZU9 778 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 GABRG1Q8N1C3 465 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 TMCO5AQ8N6Q1 288 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 IGFBPL1Q8WX77 278 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 ROPN1LQ96C74 230 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 INPP5KQ9BT40 448 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 C12orf49Q9H741 205 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 EXD2Q9NVH0 621 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 KLHL13Q9P2N7 655 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 BTNL2Q9UIR0 455 aa16.53■□□□□ 0.24
COL7A1-209ENST00000474432 IGHV3-15A0A0B4J1V0 119 aa16.52■□□□□ 0.24
COL7A1-209ENST00000474432 GJE1A6NN92 205 aa16.52■□□□□ 0.24
COL7A1-209ENST00000474432 HMGN4O00479 90 aa16.52■□□□□ 0.24
COL7A1-209ENST00000474432 DIAPH2O60879 1101 aa16.52■□□□□ 0.24
COL7A1-209ENST00000474432 ADAM11O75078 769 aa16.52■□□□□ 0.24
COL7A1-209ENST00000474432 CSTAP01040 98 aa16.52■□□□□ 0.24
COL7A1-209ENST00000474432 UBTFL6P0CB48 400 aaPredicted RBP16.52■□□□□ 0.24
COL7A1-209ENST00000474432 PSMB1P20618 241 aaKnown RBP16.52■□□□□ 0.24
COL7A1-209ENST00000474432 EPHA3P29320 983 aa16.52■□□□□ 0.24
COL7A1-209ENST00000474432 S100A3P33764 101 aa16.52■□□□□ 0.24
COL7A1-209ENST00000474432 CDKN2CP42773 168 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms