RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SEC14L5O43304 696 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 BCAS1O75363 584 aaPredicted RBP11.22□□□□□ -0.61
DDX56-209ENST00000473924 HOXD4P09016 255 aaPredicted RBP11.22□□□□□ -0.61
DDX56-209ENST00000473924 GP1BBP13224 206 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 CPN1P15169 458 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 PRKCAP17252 672 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 PTGER4P35408 488 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 LHX2P50458 406 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 SLC7A2P52569 658 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 EEF1A1P68104 462 aaKnown RBP11.22□□□□□ -0.61
DDX56-209ENST00000473924 POLEQ07864 2286 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 C1orf185Q5T7R7 199 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 FAM91A1Q658Y4 838 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 TMEM211Q6ICI0 200 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 ERICH5Q6P6B1 374 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 B3GNT6Q6ZMB0 384 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 CHMP1BQ7LBR1 199 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 ARMC8Q8IUR7 673 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 GTPBP8Q8N3Z3 284 aaPredicted RBP11.22□□□□□ -0.61
DDX56-209ENST00000473924 MEIOBQ8N635 442 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 FITM2Q8N6M3 262 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 OR2T12Q8NG77 320 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 FBXO27Q8NI29 283 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 SLC26A7Q8TE54 656 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 ST8SIA1Q92185 356 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 REXO5Q96IC2 774 aaKnown RBP11.22□□□□□ -0.61
DDX56-209ENST00000473924 MRGPRX4Q96LA9 322 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 NPAS1Q99742 590 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 GPATCH1Q9BRR8 931 aaKnown RBP11.22□□□□□ -0.61
DDX56-209ENST00000473924 ARL8BQ9NVJ2 186 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 SLC13A4Q9UKG4 626 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 AP4B1Q9Y6B7 739 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 CFAP73A6NFT4 308 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 FAM220BPB1ANY3 271 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 M0QX08 132 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 GKN3PP0CG01 181 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 ZNF708P17019 499 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 ADH6P28332 368 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 PRKAR1BP31321 381 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 IDH2P48735 452 aaKnown RBP11.21□□□□□ -0.61
DDX56-209ENST00000473924 GZMMP51124 257 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 MNAT1P51948 309 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 EEFSECP57772 596 aaKnown RBP11.21□□□□□ -0.61
DDX56-209ENST00000473924 PSME3P61289 254 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 COPZ1P61923 177 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 KRT72Q14CN4 511 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 BCL2A1Q16548 175 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 TMEM44Q2T9K0 475 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 POMZP3Q6PJE2 187 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 ZNF550Q7Z398 422 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 PATL1Q86TB9 770 aaKnown RBP11.21□□□□□ -0.61
DDX56-209ENST00000473924 CALHM3Q86XJ0 350 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 GRAMD2AQ8IUY3 354 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 SLC15A3Q8IY34 581 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 CLIP4Q8N3C7 705 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 BHLHE22Q8NFJ8 381 aaPredicted RBP11.21□□□□□ -0.61
DDX56-209ENST00000473924 POC1BQ8TC44 478 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 CCDC120Q96HB5 630 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 ZNF583Q96ND8 569 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 TRIB1Q96RU8 372 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 SERINC1Q9NRX5 453 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 CMTM6Q9NX76 183 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 KLHL28Q9NXS3 571 aa11.21□□□□□ -0.61
DDX56-209ENST00000473924 GCN1Q92616 2671 aaKnown RBP11.21□□□□□ -0.62
DDX56-209ENST00000473924 HELZ2Q9BYK8 2649 aaKnown RBP11.21□□□□□ -0.62
DDX56-209ENST00000473924 ELOVL7A1L3X0 281 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 EIF1AYO14602 144 aaKnown RBP11.2□□□□□ -0.62
DDX56-209ENST00000473924 AP3D1O14617 1153 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 GSTA4O15217 222 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 ZG16O60844 167 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 DNAJA2O60884 412 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 MFN2O95140 757 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 OPN1SWP03999 348 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 OPN1LWP04000 364 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 ELK4P28324 431 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 SMSP52788 366 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 CLDN18P56856 261 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 PCBP3P57721 371 aaKnown RBP11.2□□□□□ -0.62
DDX56-209ENST00000473924 SESN3P58005 492 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 RPS3AP61247 264 aaKnown RBP11.2□□□□□ -0.62
DDX56-209ENST00000473924 RAC1P63000 192 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 PLAURQ03405 335 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 LIPEQ05469 1076 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 SRSF1Q07955 248 aaKnown RBP eCLIP11.2□□□□□ -0.62
DDX56-209ENST00000473924 PMPCAQ10713 525 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 MERTKQ12866 999 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 EPS8Q12929 822 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 VEZF1Q14119 521 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 SGCBQ16585 318 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 ACSF3Q4G176 576 aaPredicted RBP11.2□□□□□ -0.62
DDX56-209ENST00000473924 SLC25A53Q5H9E4 307 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 DHRS4L2Q6PKH6 230 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 RPTNQ6XPR3 784 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 NCCRP1Q6ZVX7 275 aaPredicted RBP11.2□□□□□ -0.62
DDX56-209ENST00000473924 MICU2Q8IYU8 434 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 LILRA2Q8N149 483 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 RPRMLQ8N4K4 120 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 SMYD1Q8NB12 490 aa11.2□□□□□ -0.62
DDX56-209ENST00000473924 ATP6V1C2Q8NEY4 427 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms