RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 AGFG2O95081 481 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 PRSS23O95084 383 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 UQCRBP14927 111 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 ZNF23P17027 643 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 GCKP35557 465 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 SOX3P41225 446 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 PTDSS1P48651 473 aaKnown RBP12.1□□□□□ -0.47
BRAT1-205ENST00000473879 ARHGDIAP52565 204 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 FBXW4P57775 412 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 SMIM11AP58511 58 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 SPIBQ01892 262 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 IQCCQ4KMZ1 466 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 FNDC7Q5VTL7 733 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 GALNTL5Q7Z4T8 443 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 COMTD1Q86VU5 262 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 LACC1Q8IV20 430 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 SVOPLQ8N434 492 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 FAM98AQ8NCA5 519 aaKnown RBP12.1□□□□□ -0.47
BRAT1-205ENST00000473879 OR4D11Q8NGI4 311 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 OR6T1Q8NGN1 323 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 PHOSPHO1Q8TCT1 267 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 HGDQ93099 445 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 EME1Q96AY2 570 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 SECISBP2Q96T21 854 aaKnown RBP12.1□□□□□ -0.47
BRAT1-205ENST00000473879 C9orf16Q9BUW7 83 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 RSPO3Q9BXY4 272 aaPredicted RBP12.1□□□□□ -0.47
BRAT1-205ENST00000473879 HES7Q9BYE0 225 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 SH2D2AQ9NP31 389 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 EXOSC3Q9NQT5 275 aaKnown RBP12.1□□□□□ -0.47
BRAT1-205ENST00000473879 C8orf4Q9NR00 106 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 KLHL1Q9NR64 748 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 RLIMQ9NVW2 624 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 DNAJB12Q9NXW2 375 aaKnown RBP12.1□□□□□ -0.47
BRAT1-205ENST00000473879 FLRT3Q9NZU0 649 aa12.1□□□□□ -0.47
BRAT1-205ENST00000473879 RP1L1Q8IWN7 2480 aaPredicted RBP12.1□□□□□ -0.47
BRAT1-205ENST00000473879 DOPEY2Q9Y3R5 2298 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 ZNF264O43296 627 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 NDUFB5O43674 189 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 NME2P1O60361 137 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 FADS1O60427 444 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 DIRAS1O95057 198 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 UBTFL6P0CB48 400 aaPredicted RBP12.09□□□□□ -0.47
BRAT1-205ENST00000473879 NME2P22392 152 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 MST1P26927 711 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 PEX2P28328 305 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 RRM2P31350 389 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 DNAJA1P31689 397 aaKnown RBP12.09□□□□□ -0.47
BRAT1-205ENST00000473879 VHLP40337 213 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 TAS2R41P59536 307 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 PMP22Q01453 160 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 ZNF791Q3KP31 576 aaPredicted RBP12.09□□□□□ -0.47
BRAT1-205ENST00000473879 OGFRL1Q5TC84 451 aaPredicted RBP12.09□□□□□ -0.47
BRAT1-205ENST00000473879 PLEKHM3Q6ZWE6 761 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 TSEN54Q7Z6J9 526 aaKnown RBP12.09□□□□□ -0.47
BRAT1-205ENST00000473879 ZDHHC13Q8IUH4 622 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 PIK3C3Q8NEB9 887 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 FAM71CQ8NEG0 241 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 OR5M3Q8NGP4 307 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 OR5K1Q8NHB7 308 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 SSC4DQ8WTU2 575 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 CNOT9Q92600 299 aaKnown RBP12.09□□□□□ -0.47
BRAT1-205ENST00000473879 PSMG3-AS1Q96PY0 264 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 EPYCQ99645 322 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 MCHR1Q99705 422 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 ZNF559Q9BR84 538 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 FNDC11Q9BVV2 318 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 METTL7AQ9H8H3 244 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 SDHAF3Q9NRP4 125 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 HPF1Q9NWY4 346 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 KLRF1Q9NZS2 232 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 ACAD8Q9UKU7 415 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 SLC5A6Q9Y289 635 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 SAMHD1Q9Y3Z3 626 aaKnown RBP12.09□□□□□ -0.47
BRAT1-205ENST00000473879 TESMINQ9Y4I5 508 aa12.09□□□□□ -0.47
BRAT1-205ENST00000473879 USP9XQ93008 2570 aaPredicted RBP12.09□□□□□ -0.47
BRAT1-205ENST00000473879 HIVEP3Q5T1R4 2406 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 SAC3D1A6NKF1 404 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 J3KTA2 159 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 TNFRSF11BO00300 401 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 FRS3O43559 492 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 SCO2O43819 266 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 PEX1O43933 1283 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 EIF4E2O60573 245 aaKnown RBP12.08□□□□□ -0.48
BRAT1-205ENST00000473879 CYP7B1O75881 506 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 OR6B1O95007 311 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 OR5F1O95221 314 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 GADD45GO95257 159 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 ANGPTL1O95841 491 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 H1F0P07305 194 aaKnown RBP12.08□□□□□ -0.48
BRAT1-205ENST00000473879 FPR1P21462 350 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 YAP1P46937 504 aaKnown RBP12.08□□□□□ -0.48
BRAT1-205ENST00000473879 SLC6A8P48029 635 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 RNF144AP50876 292 aaPredicted RBP12.08□□□□□ -0.48
BRAT1-205ENST00000473879 ZNF136P52737 540 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 CDH12P55289 794 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 ST3GAL3Q11203 375 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 SNTA1Q13424 505 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 CD226Q15762 336 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 NPTX1Q15818 432 aa12.08□□□□□ -0.48
BRAT1-205ENST00000473879 ENTPD8Q5MY95 495 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms