RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 ZNF665Q9H7R5 613 aa2.04□□□□□ -2.08
CALD1-216ENST00000473714 KCNK13Q9HB14 408 aa2.04□□□□□ -2.08
CALD1-216ENST00000473714 PNPLA3Q9NST1 481 aa2.04□□□□□ -2.08
CALD1-216ENST00000473714 INTS9Q9NV88 658 aaKnown RBP2.04□□□□□ -2.08
CALD1-216ENST00000473714 CNOT2Q9NZN8 540 aaKnown RBP2.04□□□□□ -2.08
CALD1-216ENST00000473714 UXTQ9UBK9 157 aaPredicted RBP2.04□□□□□ -2.08
CALD1-216ENST00000473714 LAMP5Q9UJQ1 280 aa2.04□□□□□ -2.08
CALD1-216ENST00000473714 FBXL4Q9UKA2 621 aa2.04□□□□□ -2.08
CALD1-216ENST00000473714 ELF5Q9UKW6 265 aaPredicted RBP2.04□□□□□ -2.08
CALD1-216ENST00000473714 SLC9A8Q9Y2E8 581 aa2.04□□□□□ -2.08
CALD1-216ENST00000473714 RRP15Q9Y3B9 282 aaKnown RBP2.04□□□□□ -2.08
CALD1-216ENST00000473714 OR1A2Q9Y585 309 aa2.04□□□□□ -2.08
CALD1-216ENST00000473714 CPQQ9Y646 472 aa2.04□□□□□ -2.08
CALD1-216ENST00000473714 U3KQV3 271 aa2.04□□□□□ -2.08
CALD1-216ENST00000473714 ABCA13Q86UQ4 5058 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 A0A0U1RRA0 63 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 SMIM28A0A1B0GU29 152 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 TRIM64CA6NLI5 447 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 A8MUI8 341 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 PRAC2D3DTV9 90 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 RIPK2O43353 540 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 FGF17O60258 216 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 CACNG3O60359 315 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 VPS26AO75436 327 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 TRMUO75648 421 aaKnown RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 TOM1L1O75674 476 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 CDC123O75794 336 aaPredicted RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 NOL4O94818 638 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 MFN2O95140 757 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 ANP32DO95626 131 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 CPNE6O95741 557 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 TOMM40O96008 361 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 HOXD4P09016 255 aaPredicted RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 IGHV4-38-2P0DP08 117 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 DUTP33316 252 aaKnown RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 SOX6P35712 828 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 MAGEA11P43364 429 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 TNFSF10P50591 281 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 METAP1P53582 386 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 HILS1P60008 231 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 OSTNP61366 133 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 NOP14P78316 857 aaKnown RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 SLC7A9P82251 487 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 CDKL1Q00532 357 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 OTUD4Q01804 1114 aaKnown RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 POU3F1Q03052 451 aaPredicted RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 SRYQ05066 204 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 ELP6Q0PNE2 266 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 PDZK1IP1Q13113 114 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 ZKSCAN8Q15776 578 aaPredicted RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 SLC25A53Q5H9E4 307 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 CFAP157Q5JU67 520 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 DCAF12Q5T6F0 453 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 ATAD3BQ5T9A4 648 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 ARHGAP17Q68EM7 881 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 SULT1C3Q6IMI6 304 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 ZNF770Q6IQ21 691 aaPredicted RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 ZSCAN25Q6NSZ9 544 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 CASC1Q6TDU7 716 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 TMEM207Q6UWW9 146 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 Q6ZS92 163 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 C18orf65Q6ZTR6 163 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 CYP4V2Q6ZWL3 525 aaPredicted RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 ASRGL1Q7L266 308 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 P4HA3Q7Z4N8 544 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 CPEB2Q7Z5Q1 589 aaKnown RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 CUZD1Q86UP6 607 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 CDC20BQ86Y33 519 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 BBS7Q8IWZ6 715 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 KIRREL3Q8IZU9 778 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 CENPSQ8N2Z9 138 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 LIX1Q8N485 282 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 RNF148Q8N7C7 305 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 DNAAF3Q8N9W5 541 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 KBTBD3Q8NAB2 608 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 MLKLQ8NB16 471 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 TMEM178AQ8NBL3 297 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 FAM71CQ8NEG0 241 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 IPMKQ8NFU5 416 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 OR52B4Q8NGK2 314 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 OR6S1Q8NH40 331 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 OR4L1Q8NH43 312 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 SMPDL3AQ92484 453 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 WBP2Q969T9 261 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 SLC35C1Q96A29 364 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 RAB7BQ96AH8 199 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 C18orf25Q96B23 403 aaPredicted RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 CCDC127Q96BQ5 260 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 RAB39BQ96DA2 213 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 OMA1Q96E52 524 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 GPR137Q96N19 417 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 ANKRD27Q96NW4 1050 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 TXN2Q99757 166 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 JPH2Q9BR39 696 aaPredicted RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 NUDT9Q9BW91 350 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 ILKAPQ9H0C8 392 aaPredicted RBP2.03□□□□□ -2.08
CALD1-216ENST00000473714 ING2Q9H160 280 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 NEUROG2Q9H2A3 272 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 HIPK2Q9H2X6 1198 aa2.03□□□□□ -2.08
CALD1-216ENST00000473714 ZDHHC6Q9H6R6 413 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms