RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 BCO1Q9HAY6 547 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 MRTO4Q9UKD2 239 aaKnown RBP8.21□□□□□ -1.1
VCL-204ENST00000472585 ICAM5Q9UMF0 924 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 PTGDR2Q9Y5Y4 395 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 KCNE3Q9Y6H6 103 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 HEATR1Q9H583 2144 aaKnown RBP8.21□□□□□ -1.1
VCL-204ENST00000472585 POC1B-GALNT4F8VUJ3 575 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 SMAD9O15198 467 aaKnown RBP8.2□□□□□ -1.1
VCL-204ENST00000472585 SLITRK5O94991 958 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 H6PDO95479 791 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 TGFAP01135 160 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 INHBAP08476 426 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 APEHP13798 732 aaKnown RBP8.2□□□□□ -1.1
VCL-204ENST00000472585 ECHS1P30084 290 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 FRKP42685 505 aaPredicted RBP8.2□□□□□ -1.1
VCL-204ENST00000472585 PSMD4P55036 377 aaKnown RBP8.2□□□□□ -1.1
VCL-204ENST00000472585 ACTG1P63261 375 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 HSPB3Q12988 150 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 GGTLC2Q14390 218 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 RNPS1Q15287 305 aaKnown RBP8.2□□□□□ -1.1
VCL-204ENST00000472585 STK11Q15831 433 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 GTF2IRD2BQ6EKJ0 949 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 NOXRED1Q6NXP6 359 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 GTF2IRD2Q86UP8 949 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 TDRPQ86YL5 185 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 RELL1Q8IUW5 271 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 FBXL14Q8N1E6 418 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 DEPDC4Q8N2C3 294 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 ZNF433Q8N7K0 673 aaPredicted RBP8.2□□□□□ -1.1
VCL-204ENST00000472585 ATP6V1C2Q8NEY4 427 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 NUP43Q8NFH3 380 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 B4GALNT2Q8NHY0 566 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 GPR119Q8TDV5 335 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 CPNE4Q96A23 557 aaPredicted RBP8.2□□□□□ -1.1
VCL-204ENST00000472585 C3orf49Q96BT1 292 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 MSI2Q96DH6 328 aaKnown RBP8.2□□□□□ -1.1
VCL-204ENST00000472585 L3HYPDHQ96EM0 354 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 DHRS9Q9BPW9 319 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 SOX7Q9BT81 388 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 RAB17Q9H0T7 212 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 UBQLN4Q9NRR5 601 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 CBLN4Q9NTU7 201 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 POU2F3Q9UKI9 436 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 EMCNQ9ULC0 261 aa8.2□□□□□ -1.1
VCL-204ENST00000472585 A0A1W2PQD3 144 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 VWC2LB2RUY7 222 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 G3V2L1 256 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 LILRA1O75019 489 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 IGHV3-9P01782 118 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 IFI6P09912 130 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 PABPC4LP0CB38 370 aaKnown RBP8.19□□□□□ -1.1
VCL-204ENST00000472585 BMP4P12644 408 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 PRKCAP17252 672 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 COX5AP20674 150 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 ME2P23368 584 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 NTSP30990 170 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 GSTM5P46439 218 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 ZNF41P51814 821 aaPredicted RBP8.19□□□□□ -1.1
VCL-204ENST00000472585 PKNOX1P55347 436 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 LCP2Q13094 533 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 MST1LQ2TV78 715 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 CR1LQ2VPA4 569 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 KLHL26Q53HC5 615 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 TIMM23BQ5SRD1 257 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 PDSS1Q5T2R2 415 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 LRIG3Q6UXM1 1119 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 TIFABQ6ZNK6 161 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 ZNF572Q7Z3I7 529 aaPredicted RBP8.19□□□□□ -1.1
VCL-204ENST00000472585 CDRT4Q8N9R6 151 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 OR2T11Q8NH01 316 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 ZFP90Q8TF47 636 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 REXO5Q96IC2 774 aaKnown RBP8.19□□□□□ -1.1
VCL-204ENST00000472585 MRGPRX4Q96LA9 322 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 C1QTNF6Q9BXI9 259 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 SHCBP1LQ9BZQ2 653 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 C3orf14Q9HBI5 128 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 GP6Q9HCN6 339 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 MID1IP1Q9NPA3 183 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 MIEF1Q9NQG6 463 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 SIRT3Q9NTG7 399 aaPredicted RBP8.19□□□□□ -1.1
VCL-204ENST00000472585 GIN1Q9NXP7 522 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 BAIAP2L1Q9UHR4 511 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 KCNE5Q9UJ90 142 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 ZNF180Q9UJW8 692 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 CARD8Q9Y2G2 431 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 SLC25A15Q9Y619 301 aa8.19□□□□□ -1.1
VCL-204ENST00000472585 NOTCH1P46531 2555 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 A0A0G2JK05 382 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 OR5H1A6NKK0 313 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 TTC36A6NLP5 189 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 NPIPB9F8W1W9 429 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 ETV2O00321 342 aaPredicted RBP8.18□□□□□ -1.1
VCL-204ENST00000472585 RGS14O43566 566 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 AKAP10O43572 662 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 CYTIPO60759 359 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 ENO1P06733 434 aaKnown RBP8.18□□□□□ -1.1
VCL-204ENST00000472585 ATP5F1P24539 256 aaPredicted RBP8.18□□□□□ -1.1
VCL-204ENST00000472585 CD40P25942 277 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 ELK4P28324 431 aa8.18□□□□□ -1.1
VCL-204ENST00000472585 PHBP35232 272 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms