RNA–Protein interactions for RNA: ENST00000472561.5

RASSF4-208, Transcript of Ras association domain family member 4, human

TSL 3

Gene RASSF4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RASSF4-208	ENST00000472561	CPN1	P15169	458 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	ZNF17	P17021	662 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	PRKCA	P17252	672 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	POU3F2	P20265	443 aa	Predicted RBP	13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	ADH6	P28332	368 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	PRKAR1B	P31321	381 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	IDH2	P48735	452 aa	Known RBP	13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	LHX2	P50458	406 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	PCBP3	P57721	371 aa	Known RBP	13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	SESN3	P58005	492 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	MXRA7	P84157	204 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	PLAUR	Q03405	335 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	LIPE	Q05469	1076 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	FOXF1	Q12946	379 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	VEZF1	Q14119	521 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	BCL2A1	Q16548	175 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	RNF220	Q5VTB9	566 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	ZNF550	Q7Z398	422 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	PATL1	Q86TB9	770 aa	Known RBP	13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	GRAMD2A	Q8IUY3	354 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	ZNF440	Q8IYI8	595 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	SLC26A7	Q8TE54	656 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	TMEM234	Q8WY98	164 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	ZNF524	Q96C55	264 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	MRGPRX4	Q96LA9	322 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	STOML1	Q9UBI4	398 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	ERRFI1	Q9UJM3	462 aa	Predicted RBP	13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	SLC13A4	Q9UKG4	626 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	MEMO1	Q9Y316	297 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	AP4B1	Q9Y6B7	739 aa		13.43	□□□□□ -0.26
RASSF4-208	ENST00000472561	ELOVL7	A1L3X0	281 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	C7orf72	A4D263	438 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561		B2RBV5	119 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561		E9PLN8	166 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	NME4	O00746	187 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	AP3D1	O14617	1153 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	TPST1	O60507	370 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	ADAM11	O75078	769 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	AGFG2	O95081	481 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	OPN1LW	P04000	364 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	HOXD4	P09016	255 aa	Predicted RBP	13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	GP1BB	P13224	206 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	UQCRB	P14927	111 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	ZNF708	P17019	499 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	PSMA4	P25789	261 aa	Known RBP	13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	ACVR2A	P27037	513 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	PTGER4	P35408	488 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	CLDN18	P56856	261 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	EEFSEC	P57772	596 aa	Known RBP	13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	SLC25A3	Q00325	362 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	DMTN	Q08495	405 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	EPS8	Q12929	822 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.42	□□□□□ -0.26	7e-8	■■■■□ 26.4
RASSF4-208	ENST00000472561	TMEM211	Q6ICI0	200 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	DHRS4L2	Q6PKH6	230 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	C16orf89	Q6UX73	402 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	CCDC80	Q76M96	950 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	TRPM8	Q7Z2W7	1104 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	ULK2	Q8IYT8	1036 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	UBQLNL	Q8IYU4	475 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	MICU2	Q8IYU8	434 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	FAM26E	Q8N5C1	309 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	MEIOB	Q8N635	442 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	SMYD1	Q8NB12	490 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	ST8SIA1	Q92185	356 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	SMPDL3B	Q92485	455 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	VKORC1	Q9BQB6	163 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	PINK1	Q9BXM7	581 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	SPAG4	Q9NPE6	437 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	ACER3	Q9NUN7	267 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	ADA2	Q9NZK5	511 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	TMEM181	Q9P2C4	612 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	GMPR2	Q9P2T1	348 aa	Known RBP	13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	NCKAP5	O14513	1909 aa		13.42	□□□□□ -0.26
RASSF4-208	ENST00000472561	SVIL	O95425	2214 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561		H0Y3Z8	333 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	GSTA4	O15217	222 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	SEC14L5	O43304	696 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	OPN1SW	P03999	348 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	CALB2	P22676	271 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	ACAA2	P42765	397 aa	Known RBP	13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	GSK3B	P49841	420 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	SUCLG1	P53597	346 aa	Known RBP	13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	COPZ1	P61923	177 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	RAC1	P63000	192 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	DUSP7	Q16829	419 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	GLIPR1L2	Q4G1C9	344 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	SLC25A53	Q5H9E4	307 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	C1orf185	Q5T7R7	199 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	RTL6	Q6ICC9	239 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	CHMP1B	Q7LBR1	199 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	PGAM4	Q8N0Y7	254 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	LILRA2	Q8N149	483 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	ZPLD1	Q8TCW7	415 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	ALG2	Q9H553	416 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	NDE1	Q9NXR1	346 aa		13.41	□□□□□ -0.26
RASSF4-208	ENST00000472561	KLHL28	Q9NXS3	571 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms