RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 TUFT1Q9NNX1 390 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 IL26Q9NPH9 171 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 ESM1Q9NQ30 184 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 ZNF331Q9NQX6 463 aaPredicted RBP2.77□□□□□ -1.97
CD46-213ENST00000471987 VPS54Q9P1Q0 977 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 STX18Q9P2W9 335 aaKnown RBP2.77□□□□□ -1.97
CD46-213ENST00000471987 KCNK6Q9Y257 313 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 MRPS2Q9Y399 296 aaKnown RBP2.77□□□□□ -1.97
CD46-213ENST00000471987 SPACA6W5XKT8 324 aa2.77□□□□□ -1.97
CD46-213ENST00000471987 A0A1B0GUL7 405 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 OOEPA6NGQ2 149 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 YJEFN3A6XGL0 299 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 H3BQV1 296 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 GOLGA8MH3BSY2 632 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 CYB561D2O14569 222 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 MTX2O75431 263 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 CIB2O75838 187 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 GLCEO94923 617 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 AKR7A3O95154 331 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 KRT8P05787 483 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 SERPINF2P08697 491 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 PABPC4LP0CB38 370 aaKnown RBP2.76□□□□□ -1.97
CD46-213ENST00000471987 ZCCHC18P0CG32 403 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 CCDC192P0DO97 292 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 CPN2P22792 545 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 IGHV1-2P23083 117 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 PSMA5P28066 241 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 NMT1P30419 496 aaKnown RBP2.76□□□□□ -1.97
CD46-213ENST00000471987 RRM2P31350 389 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 POU3F4P49335 361 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 PPOXP50336 477 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 GDI2P50395 445 aaKnown RBP2.76□□□□□ -1.97
CD46-213ENST00000471987 TNFSF10P50591 281 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 ATP5IP56385 69 aaPredicted RBP2.76□□□□□ -1.97
CD46-213ENST00000471987 KIAA1024LP59773 190 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 POLR2GP62487 172 aaKnown RBP eCLIP2.76□□□□□ -1.97
CD46-213ENST00000471987 SPIBQ01892 262 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 SCGB2A2Q13296 93 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 NKAIN1Q4KMZ8 207 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 MPPE1Q53F39 396 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 CFAP157Q5JU67 520 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 PRAMEF20Q5VT98 475 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 TMEM270Q6UE05 265 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 ADAMTSL5Q6ZMM2 481 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 ASPGQ86U10 573 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 TPRA1Q86W33 373 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 SIAH3Q8IW03 269 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 ELMOD2Q8IZ81 293 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 SFRP1Q8N474 314 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 CSGALNACT2Q8N6G5 542 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 BHLHE23Q8NDY6 225 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 NEK11Q8NG66 645 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 OR4L1Q8NH43 312 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 ZNF461Q8TAF7 563 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 PDCD6IPQ8WUM4 868 aaKnown RBP2.76□□□□□ -1.97
CD46-213ENST00000471987 NT5C3BQ969T7 300 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 OPTNQ96CV9 577 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 CEP19Q96LK0 163 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 TBX15Q96SF7 602 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 ZBTB18Q99592 522 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 CGREF1Q99674 301 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 EDEM2Q9BV94 578 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 HCAR1Q9BXC0 346 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 SHCBP1LQ9BZQ2 653 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 RAB33BQ9H082 229 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 SLC26A1Q9H2B4 701 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 NANOGQ9H9S0 305 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 PATZ1Q9HBE1 687 aaKnown RBP2.76□□□□□ -1.97
CD46-213ENST00000471987 LZTFL1Q9NQ48 299 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 FARSBQ9NSD9 589 aaKnown RBP2.76□□□□□ -1.97
CD46-213ENST00000471987 DDX28Q9NUL7 540 aaKnown RBP2.76□□□□□ -1.97
CD46-213ENST00000471987 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.76□□□□□ -1.97
CD46-213ENST00000471987 KLHL28Q9NXS3 571 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 SMPD3Q9NY59 655 aaPredicted RBP2.76□□□□□ -1.97
CD46-213ENST00000471987 ANKMY1Q9P2S6 941 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 HMGXB4Q9UGU5 601 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
CD46-213ENST00000471987 RAI1Q7Z5J4 1906 aaPredicted RBP2.76□□□□□ -1.97
CD46-213ENST00000471987 TTC21AQ8NDW8 1320 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 SH3TC1Q8TE82 1336 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 A0A075B6Q4 140 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 NPIPA5A0A0B4J1W7 369 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 A0A1B0GTQ1 180 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 ZNF716A6NP11 495 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 IQCF5A8MTL0 148 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 NPIPA5E9PKD4 350 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 SPECC1L-ADORA2AF8WAN1 911 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 DNALI1O14645 258 aaPredicted RBP2.75□□□□□ -1.97
CD46-213ENST00000471987 MED7O43513 233 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 CRCPO75575 148 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 ATP5HO75947 161 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 NEBLO76041 1014 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 PDE5AO76074 875 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 MYO1DO94832 1006 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 MFN2O95140 757 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 TXNDC12O95881 172 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 AK1P00568 194 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 GH1P01241 217 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 ZNF735P0CB33 412 aa2.75□□□□□ -1.97
CD46-213ENST00000471987 THRBP10828 461 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms