RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 CFLARO15519 480 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 SMPD2O60906 423 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 UGT2B17O75795 530 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 SYNGR4O95473 234 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 NUDT14O95848 222 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 CHEK2O96017 543 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 PLGP00747 810 aaPredicted RBP7.17□□□□□ -1.26
USP48-207ENST00000471752 ADAP00813 363 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 TUBBP07437 444 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 SOD3P08294 240 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 ALDOCP09972 364 aaKnown RBP7.17□□□□□ -1.26
USP48-207ENST00000471752 MATN1P21941 496 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 HPCAL1P37235 193 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 CDKN2CP42773 168 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 PTH2RP49190 550 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 P2RX1P51575 399 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 ZNF41P51814 821 aaPredicted RBP7.17□□□□□ -1.26
USP48-207ENST00000471752 CTBP2P56545 445 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 CLDN8P56748 225 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 NAA20P61599 178 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 EMX2Q04743 252 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 KRTAP1-1Q07627 177 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 SKP2Q13309 424 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 QPRTQ15274 297 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 TAB1Q15750 504 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 MAPK11Q15759 364 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 KRTAP21-3Q3LHN1 58 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 TIGD2Q4W5G0 525 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 ATP6AP1LQ52LC2 224 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 TNFAIP8L2Q6P589 184 aaPredicted RBP7.17□□□□□ -1.26
USP48-207ENST00000471752 ZCCHC12Q6PEW1 402 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 TFAP2EQ6VUC0 442 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 ZNF704Q6ZNC4 412 aaPredicted RBP7.17□□□□□ -1.26
USP48-207ENST00000471752 ESPNLQ6ZVH7 1005 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 FCRLAQ7L513 359 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 R3HCC1LQ7Z5L2 792 aaKnown RBP7.17□□□□□ -1.26
USP48-207ENST00000471752 CCDC103Q8IW40 242 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 RNF128Q8TEB7 428 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 ZBTB8AQ96BR9 441 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 COX4I2Q96KJ9 171 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 PPP3R2Q96LZ3 170 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 STACQ99469 402 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 CCL19Q99731 98 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 MDFIQ99750 246 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 TMEM204Q9BSN7 226 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 INPP5KQ9BT40 448 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 RSPO3Q9BXY4 272 aaPredicted RBP7.17□□□□□ -1.26
USP48-207ENST00000471752 PARD6BQ9BYG5 372 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 OR11A1Q9GZK7 315 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 OR51I1Q9H343 314 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 SLC6A13Q9NSD5 602 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 ZNF226Q9NYT6 803 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 NPAP1Q9NZP6 1156 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 ADAM21Q9UKJ8 722 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 EMC9Q9Y3B6 208 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 DTNAQ9Y4J8 743 aa7.17□□□□□ -1.26
USP48-207ENST00000471752 SERINC4A6NH21 518 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 TMEM114B3SHH9 223 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 AP3D1O14617 1153 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 DNAJA2O60884 412 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 LYZL6O75951 148 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 CD8AP01732 235 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 IGHV3-9P01782 118 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 GSNP06396 782 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 UBTFL6P0CB48 400 aaPredicted RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 DHRS4L1P0CG22 281 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 HPGDP15428 266 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 CCNA2P20248 432 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 PRPS1L1P21108 318 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 PCSK6P29122 969 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 ADSLP30566 484 aaPredicted RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 RYKP34925 604 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 SOAT1P35610 550 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 PCYT1AP49585 367 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 CCR4P51679 360 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 WDR4P57081 412 aaKnown RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 SESN3P58005 492 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 ABCE1P61221 599 aaKnown RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 UFM1P61960 85 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 EEF1A1P68104 462 aaKnown RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 OCRLQ01968 901 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 CHRNEQ04844 493 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 IFFO1Q0D2I5 559 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 SYPL1Q16563 259 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 SPANXN4Q5MJ08 99 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 COX20Q5RI15 118 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 EEF1A1P5Q5VTE0 462 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 TYW3Q6IPR3 259 aaKnown RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 BIVMQ86UB2 503 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 ANKFN1Q8N957 763 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 OR56A1Q8NGH5 318 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 OR5W2Q8NH69 310 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 XAGE5Q8WWM1 108 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 CNOT9Q92600 299 aaKnown RBP7.16□□□□□ -1.26
USP48-207ENST00000471752 AKAP1Q92667 903 aaKnown RBP eCLIP7.16□□□□□ -1.26
USP48-207ENST00000471752 HTRA1Q92743 480 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 ARL5BQ96KC2 179 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 PSD2Q9BQI7 771 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 TMEM109Q9BVC6 243 aa7.16□□□□□ -1.26
USP48-207ENST00000471752 NUF2Q9BZD4 464 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms