RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 NSG1A0A0A6YYJ2 146 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 PROB1E7EW31 1015 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 GTPBP1O00178 669 aaKnown RBP8.59□□□□□ -1.03
VPS52-216ENST00000471309 WWP2O00308 870 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 ADAM10O14672 748 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 TERTO14746 1132 aaKnown RBP8.59□□□□□ -1.03
VPS52-216ENST00000471309 OIP5O43482 229 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 NDUFB5O43674 189 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 WBP4O75554 376 aaKnown RBP8.59□□□□□ -1.03
VPS52-216ENST00000471309 NTN1O95631 604 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 TFAP2AP05549 437 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 FBXO45P0C2W1 286 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 PNMTP11086 282 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 IFI30P13284 250 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 ATP6V1B1P15313 513 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 GABRB1P18505 474 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 TCN2P20062 427 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 GPR4P46093 362 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 RPL5P46777 297 aaKnown RBP8.59□□□□□ -1.03
VPS52-216ENST00000471309 IDH2P48735 452 aaKnown RBP8.59□□□□□ -1.03
VPS52-216ENST00000471309 NR1H2P55055 460 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 RPS15P62841 145 aaKnown RBP8.59□□□□□ -1.03
VPS52-216ENST00000471309 CSNK2BP67870 215 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 NHLH1Q02575 133 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 DESI1Q6ICB0 168 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 WBP2NLQ6ICG8 309 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 ZNF773Q6PK81 442 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 CBLN3Q6UW01 205 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 LYPD8Q6UX82 237 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 ZNF620Q6ZNG0 422 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 TMPRSS11FQ6ZWK6 438 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 NDUFAF7Q7L592 441 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 NUP54Q7Z3B4 507 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 KIF18BQ86Y91 864 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 NLGN4XQ8N0W4 816 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 ARMC10Q8N2F6 343 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 CADM2Q8N3J6 435 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 SLC15A4Q8N697 577 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 TMCO5AQ8N6Q1 288 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 NLGN4YQ8NFZ3 816 aaPredicted RBP8.59□□□□□ -1.03
VPS52-216ENST00000471309 RHOXF1Q8NHV9 184 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 TEX47Q8TBZ9 253 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 C3orf49Q96BT1 292 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 TMCO6Q96DC7 493 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 GPR87Q9BY21 358 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 SLC19A3Q9BZV2 496 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 ADNPQ9H2P0 1102 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 LIN28AQ9H9Z2 209 aaKnown RBP8.59□□□□□ -1.03
VPS52-216ENST00000471309 C12orf10Q9HB07 376 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 ZBTB20Q9HC78 741 aaPredicted RBP8.59□□□□□ -1.03
VPS52-216ENST00000471309 ZNF226Q9NYT6 803 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 ICAM5Q9UMF0 924 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 CARD8Q9Y2G2 431 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 CDH10Q9Y6N8 788 aa8.59□□□□□ -1.03
VPS52-216ENST00000471309 A0A087WUJ7 227 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.58□□□□□ -1.04
VPS52-216ENST00000471309 SPAARA0A1B0GVQ0 90 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 HTR3EA5X5Y0 456 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 DPPA5A6NC42 116 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.58□□□□□ -1.04
VPS52-216ENST00000471309 HCRTR2O43614 444 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 ZNF354AO60765 605 aaPredicted RBP8.58□□□□□ -1.04
VPS52-216ENST00000471309 OR2J2O76002 312 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 TNFSF15O95150 251 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 IGF2P01344 180 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 LINGO3P0C6S8 592 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 CD82P27701 267 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 POU1F1P28069 291 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 CCR4P51679 360 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 SMSP52788 366 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 CDH15P55291 814 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 SUMO3P55854 103 aaPredicted RBP8.58□□□□□ -1.04
VPS52-216ENST00000471309 FBXW4P57775 412 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 SNRPGP62308 76 aaKnown RBP8.58□□□□□ -1.04
VPS52-216ENST00000471309 CDK5Q00535 292 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 DNASE1L3Q13609 305 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 CBFBQ13951 182 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 SSPNQ14714 243 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 NTRK2Q16620 822 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 KIF26BQ2KJY2 2108 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 TMEM236Q5W0B7 351 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 RPL13AP3Q6NVV1 102 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 SLC27A4Q6P1M0 643 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 CASP12Q6UXS9 341 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 C16orf47Q6ZP98 133 aaPredicted RBP8.58□□□□□ -1.04
VPS52-216ENST00000471309 MRGPREQ86SM8 312 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 ATG4DQ86TL0 474 aaPredicted RBP8.58□□□□□ -1.04
VPS52-216ENST00000471309 MARCH3Q86UD3 253 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 TMPRSS12Q86WS5 348 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 P3H2Q8IVL5 708 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 CDK20Q8IZL9 346 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 SLC43A2Q8N370 569 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 AMER2Q8N7J2 671 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 OR5W2Q8NH69 310 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 PFN4Q8NHR9 129 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 RNF217Q8TC41 542 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 BRIX1Q8TDN6 353 aaKnown RBP8.58□□□□□ -1.04
VPS52-216ENST00000471309 THAP3Q8WTV1 239 aaPredicted RBP8.58□□□□□ -1.04
VPS52-216ENST00000471309 TRUB1Q8WWH5 349 aaKnown RBP8.58□□□□□ -1.04
VPS52-216ENST00000471309 OSTF1Q92882 214 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms