RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 GLIPR2Q9H4G4 154 aa5.21□□□□□ -1.58
VARS-222ENST00000470953 BARX1Q9HBU1 254 aaPredicted RBP5.21□□□□□ -1.58
VARS-222ENST00000470953 GALNT9Q9HCQ5 603 aa5.21□□□□□ -1.58
VARS-222ENST00000470953 SSU72Q9NP77 194 aaKnown RBP5.21□□□□□ -1.58
VARS-222ENST00000470953 SERHLQ9NQF3 203 aa5.21□□□□□ -1.58
VARS-222ENST00000470953 SDHAF3Q9NRP4 125 aa5.21□□□□□ -1.58
VARS-222ENST00000470953 ZCCHC3Q9NUD5 404 aaKnown RBP5.21□□□□□ -1.58
VARS-222ENST00000470953 ARGLU1Q9NWB6 273 aaPredicted RBP5.21□□□□□ -1.58
VARS-222ENST00000470953 SIRT5Q9NXA8 310 aa5.21□□□□□ -1.58
VARS-222ENST00000470953 FAM53CQ9NYF3 392 aa5.21□□□□□ -1.58
VARS-222ENST00000470953 ELOVL5Q9NYP7 299 aa5.21□□□□□ -1.58
VARS-222ENST00000470953 NOP53Q9NZM5 478 aaKnown RBP5.21□□□□□ -1.58
VARS-222ENST00000470953 NKX1-2Q9UD57 310 aaPredicted RBP5.21□□□□□ -1.58
VARS-222ENST00000470953 RAB21Q9UL25 225 aa5.21□□□□□ -1.58
VARS-222ENST00000470953 PCDHB10Q9UN67 800 aa5.21□□□□□ -1.58
VARS-222ENST00000470953 FAF1Q9UNN5 650 aaPredicted RBP5.21□□□□□ -1.58
VARS-222ENST00000470953 PCDHGB5Q9Y5G0 923 aa5.21□□□□□ -1.58
VARS-222ENST00000470953 ACTL7BQ9Y614 415 aa5.21□□□□□ -1.58
VARS-222ENST00000470953 PLXNB1O43157 2135 aa5.21□□□□□ -1.58
VARS-222ENST00000470953 TMEM120BA0PK00 339 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 C2orf72A6NCS6 295 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 TO15178 435 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 SMAD9O15198 467 aaKnown RBP5.2□□□□□ -1.58
VARS-222ENST00000470953 EMC8O43402 210 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 TYROBPO43914 113 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 GMFGO60234 142 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 ICOSLGO75144 302 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 NME6O75414 186 aaPredicted RBP5.2□□□□□ -1.58
VARS-222ENST00000470953 LYPLA1O75608 230 aaPredicted RBP5.2□□□□□ -1.58
VARS-222ENST00000470953 ALOX5P09917 674 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 PRPS2P11908 318 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 BCKDHAP12694 445 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 CPN1P15169 458 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 SLC25A16P16260 332 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 PRPS1L1P21108 318 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 S1PR1P21453 382 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 TBXA2RP21731 343 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 BGNP21810 368 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 GABRA3P34903 492 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 SLC1A6P48664 564 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 PRIM2P49643 509 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 MAGOHP61326 146 aaKnown RBP5.2□□□□□ -1.58
VARS-222ENST00000470953 HPCAP84074 193 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 MGAT2Q10469 447 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 STX3Q13277 289 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 GAB1Q13480 694 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 GGTLC2Q14390 218 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 PTGR1Q14914 329 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 FAM189A2Q15884 450 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 EXOC3L2Q2M3D2 409 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 PGS1Q32NB8 556 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 LSM12Q3MHD2 195 aaKnown RBP5.2□□□□□ -1.58
VARS-222ENST00000470953 ZNF672Q499Z4 452 aaPredicted RBP5.2□□□□□ -1.58
VARS-222ENST00000470953 CYP27C1Q4G0S4 372 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 RFTN2Q52LD8 501 aaPredicted RBP5.2□□□□□ -1.58
VARS-222ENST00000470953 IL23RQ5VWK5 629 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 RUSC1-AS1Q66K80 236 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 ATG16L1Q676U5 607 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 TIGD3Q6B0B8 471 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 AAGABQ6PD74 315 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 NPSR1Q6W5P4 371 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 RNF165Q6ZSG1 346 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 P4HA3Q7Z4N8 544 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 ANKRD13BQ86YJ7 626 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 TRIM42Q8IWZ5 723 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 OR2L13Q8N349 312 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 TMCO5AQ8N6Q1 288 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 ZNF614Q8N883 585 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 ZNF781Q8N8C0 355 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 CDRT4Q8N9R6 151 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 FAM83FQ8NEG4 500 aaPredicted RBP5.2□□□□□ -1.58
VARS-222ENST00000470953 KBTBD8Q8NFY9 601 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 OR7A2PQ8NGA2 310 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 OR56A1Q8NGH5 318 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 C17orf50Q8WW18 174 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 DYDC1Q8WWB3 177 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 FAM168AQ92567 244 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 HGDQ93099 445 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 C3orf49Q96BT1 292 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 MTERF3Q96E29 417 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 ELP4Q96EB1 424 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 C11orf24Q96F05 449 aaPredicted RBP5.2□□□□□ -1.58
VARS-222ENST00000470953 SLC35A4Q96G79 324 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 EGLN2Q96KS0 407 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 VSTM2LQ96N03 204 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 NODALQ96S42 347 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 ZBTB18Q99592 522 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 SLC39A3Q9BRY0 314 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 TUBB1Q9H4B7 451 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 PTGES2Q9H7Z7 377 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 HHATLQ9HCP6 504 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 ACSS1Q9NUB1 689 aaPredicted RBP5.2□□□□□ -1.58
VARS-222ENST00000470953 TAS2R10Q9NYW0 307 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 GIMAP2Q9UG22 337 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 BAIAP2L1Q9UHR4 511 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 ZNF639Q9UID6 485 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 PCDHGB4Q9UN71 923 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 ABCG2Q9UNQ0 655 aa5.2□□□□□ -1.58
VARS-222ENST00000470953 C19orf53Q9UNZ5 99 aaPredicted RBP5.2□□□□□ -1.58
VARS-222ENST00000470953 GPR55Q9Y2T6 319 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms