RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 KIAA1614Q5VZ46 1190 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 REEP3Q6NUK4 255 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 SLC27A4Q6P1M0 643 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 SHISA6Q6ZSJ9 500 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 ADGRF3Q8IZF5 1079 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 RERGQ96A58 199 aaPredicted RBP11.51□□□□□ -0.57
USP11-206ENST00000469080 RDH12Q96NR8 316 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 LAMP5Q9UJQ1 280 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 CLEC4AQ9UMR7 237 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 EXO1Q9UQ84 846 aaKnown RBP11.51□□□□□ -0.57
USP11-206ENST00000469080 CACNA1HO95180 2353 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 PRSS38A1L453 326 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 HRO43593 1189 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 TGM6O95932 706 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 HPRP00739 348 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 DNASE1P24855 282 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 GPX4P36969 197 aaPredicted RBP11.51□□□□□ -0.57
USP11-206ENST00000469080 XKP51811 444 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 RGS8P57771 180 aaPredicted RBP11.51□□□□□ -0.57
USP11-206ENST00000469080 SELENOWP63302 87 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 RPE65Q16518 533 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 KIAA1161Q6NSJ0 714 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 SLC46A3Q7Z3Q1 461 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 VRK2Q86Y07 508 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 FBXO15Q8NCQ5 510 aaPredicted RBP11.51□□□□□ -0.57
USP11-206ENST00000469080 TM4SF18Q96CE8 201 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 NDRG3Q9UGV2 375 aa11.51□□□□□ -0.57
USP11-206ENST00000469080 MUC3AQ02505 3323 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 PLA2G10O15496 165 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 CEACAM5P06731 702 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 ADRB1P08588 477 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 SLC35G6P0C7Q6 338 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 NDUFB7P17568 137 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 GPR4P46093 362 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 SNRPEP62304 92 aaKnown RBP11.5□□□□□ -0.57
USP11-206ENST00000469080 ST3GAL4Q11206 333 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 SERTAD2Q14140 314 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 MICAQ29983 383 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 CRB2Q5IJ48 1285 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 FAM74A1Q5RGS3 127 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 METRNLQ641Q3 311 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 FAM111BQ6SJ93 734 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 TMEM92Q6UXU6 159 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 ZNF730Q6ZMV8 503 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 ENTHD1Q8IYW4 607 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 ZNF655Q8N720 491 aaPredicted RBP11.5□□□□□ -0.57
USP11-206ENST00000469080 EDARADDQ8WWZ3 215 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 ZNF566Q969W8 418 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 SPACA7Q96KW9 195 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 ASPNQ9BXN1 380 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 PIGUQ9H490 435 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 KCMF1Q9P0J7 381 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 MARK1Q9P0L2 795 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 SSR3Q9UNL2 185 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 V9GYH0 126 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 PLXND1Q9Y4D7 1925 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 ADAMDEC1O15204 470 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 ARL4DP49703 201 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 SHC2P98077 582 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 PRDX1Q06830 199 aaKnown RBP11.5□□□□□ -0.57
USP11-206ENST00000469080 FRMPD2BQ6IN97 320 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 CBLL1Q75N03 491 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 KIAA0907Q7Z7F0 614 aaPredicted RBP11.5□□□□□ -0.57
USP11-206ENST00000469080 WDSUB1Q8N9V3 476 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 OR13H1Q8NG92 308 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 ZNF675Q8TD23 568 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 SNX33Q8WV41 574 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 ZNF436Q9C0F3 470 aaPredicted RBP11.5□□□□□ -0.57
USP11-206ENST00000469080 GLIPR2Q9H4G4 154 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 GPATCH2Q9NW75 528 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 LOC105369274A0A096LPK9 316 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 DBX1A6NMT0 343 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 SGK494L7N484 410 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 SCN2BO60939 215 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 PAPLNO95428 1278 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 SIX6O95475 246 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 GASTP01350 101 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 LPLP06858 475 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 GPX2P18283 190 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 NDUFV2P19404 249 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 MAT1AQ00266 395 aaKnown RBP11.5□□□□□ -0.57
USP11-206ENST00000469080 LGALSLQ3ZCW2 172 aaPredicted RBP11.5□□□□□ -0.57
USP11-206ENST00000469080 ZNF311Q5JNZ3 666 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 ZNF793Q6ZN11 406 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 OR4N4Q8N0Y3 316 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 OXR1Q8N573 874 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 OR8J2Q8NGG1 315 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 TRMT10AQ8TBZ6 339 aaKnown RBP11.5□□□□□ -0.57
USP11-206ENST00000469080 GTF3AQ92664 365 aaKnown RBP11.5□□□□□ -0.57
USP11-206ENST00000469080 UPRTQ96BW1 309 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 POM121Q96HA1 1249 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 ZNF607Q96SK3 696 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 NMNAT1Q9HAN9 279 aaPredicted RBP11.5□□□□□ -0.57
USP11-206ENST00000469080 LYARQ9NX58 379 aaKnown RBP11.5□□□□□ -0.57
USP11-206ENST00000469080 PURGQ9UJV8 347 aaKnown RBP11.5□□□□□ -0.57
USP11-206ENST00000469080 YARS2Q9Y2Z4 477 aaKnown RBP11.5□□□□□ -0.57
USP11-206ENST00000469080 COLEC10Q9Y6Z7 277 aa11.5□□□□□ -0.57
USP11-206ENST00000469080 TPRP12270 2363 aaKnown RBP11.49□□□□□ -0.57
USP11-206ENST00000469080 IFNA4P05014 189 aa11.49□□□□□ -0.57
USP11-206ENST00000469080 SLC2A2P11168 524 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms