RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ZNF566Q969W8 418 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 DSN1Q9H410 356 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 SCN3BQ9NY72 215 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 MYOTQ9UBF9 498 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 TCFL5Q9UL49 500 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 FARSAQ9Y285 508 aaKnown RBP17.38■□□□□ 0.37
SMC4-209ENST00000468653 SPAARA0A1B0GVQ0 90 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 HCRTR2O43614 444 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 SCO2O43819 266 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 XPNPEP2O43895 674 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 IFI30P13284 250 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 NAGAP17050 411 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 RBM34P42696 430 aaKnown RBP17.38■□□□□ 0.37
SMC4-209ENST00000468653 GABARAPL2P60520 117 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 RPS18P62269 152 aaKnown RBP17.38■□□□□ 0.37
SMC4-209ENST00000468653 RPS15P62841 145 aaKnown RBP17.38■□□□□ 0.37
SMC4-209ENST00000468653 CASP12Q6UXS9 341 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 KIF18BQ86Y91 864 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 ESX1Q8N693 406 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 TEX47Q8TBZ9 253 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 SLC22A8Q8TCC7 542 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 SH3YL1Q96HL8 342 aaPredicted RBP17.38■□□□□ 0.37
SMC4-209ENST00000468653 IMMP1LQ96LU5 166 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 RTN4RQ9BZR6 473 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 EGLN3Q9H6Z9 239 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 ZNF226Q9NYT6 803 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 TMEM5Q9Y2B1 443 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 TPRKBQ9Y3C4 175 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 PTGES3LE9PB15 166 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 KLF4O43474 513 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 FADS1O60427 444 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 MPZL2O60487 215 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 EIF4E2O60573 245 aaKnown RBP17.37■□□□□ 0.37
SMC4-209ENST00000468653 ZNF354AO60765 605 aaPredicted RBP17.37■□□□□ 0.37
SMC4-209ENST00000468653 WBP4O75554 376 aaKnown RBP17.37■□□□□ 0.37
SMC4-209ENST00000468653 TNFSF15O95150 251 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 NADKO95544 446 aaPredicted RBP17.37■□□□□ 0.37
SMC4-209ENST00000468653 FTH1P19P0C7X4 201 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 SLC6A8P48029 635 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 FBXW4P57775 412 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 PRKCDQ05655 676 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 WBP2NLQ6ICG8 309 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 ZNF773Q6PK81 442 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 PTCHD4Q6ZW05 846 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 NDUFAF7Q7L592 441 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 OR11G2Q8NGC1 345 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 M1APQ8TC57 530 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 APH1BQ8WW43 257 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 TMCO6Q96DC7 493 aa17.37■□□□□ 0.37
SMC4-209ENST00000468653 NSG1A0A0A6YYJ2 146 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 M0R129 80 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 SOCS6O14544 535 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 FAM20BO75063 409 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 OTX2P32243 289 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 GIPRP48546 466 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 TMED10P49755 219 aaKnown RBP17.36■□□□□ 0.37
SMC4-209ENST00000468653 CSNK2BP67870 215 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 ZNF117Q03924 483 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 GINS1Q14691 196 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 SMN1Q16637 294 aaKnown RBP17.36■□□□□ 0.37
SMC4-209ENST00000468653 BROXQ5VW32 411 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 C12orf73Q69YU5 71 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 PLAG1Q6DJT9 500 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 IQCF1Q8N6M8 205 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 ZNF563Q8TA94 476 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 DPH1Q9BZG8 443 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 C20orf141Q9NUB4 165 aa17.36■□□□□ 0.37
SMC4-209ENST00000468653 UNC119BA6NIH7 251 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 TRIM64CA6NLI5 447 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 GNB5O14775 395 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 GMFGO60234 142 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 OR2J2O76002 312 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 ITPKBP27987 946 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 SMSP52788 366 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 SSPNQ14714 243 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 LINC00114Q6XXX2 140 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 SATL1Q86VE3 508 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 OSTF1Q92882 214 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 C3orf49Q96BT1 292 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 BPIFA2Q96DR5 249 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 PLA2G12AQ9BZM1 189 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 ATP13A2Q9NQ11 1180 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 KNTC1P50748 2209 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 CDC42EP2O14613 210 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 CELA2AP08217 269 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 GABRB1P18505 474 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 MAKP20794 623 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 CTBP2P56545 445 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 CDK5Q00535 292 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 SLC27A4Q6P1M0 643 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 NUP54Q7Z3B4 507 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 LSRQ86X29 649 aaPredicted RBP17.35■□□□□ 0.37
SMC4-209ENST00000468653 CCDC103Q8IW40 242 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 ZNF540Q8NDQ6 660 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 NLGN4YQ8NFZ3 816 aaPredicted RBP17.35■□□□□ 0.37
SMC4-209ENST00000468653 SGCDQ92629 289 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 NODALQ96S42 347 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 ZNF426Q9BUY5 554 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 SLC25A19Q9HC21 320 aa17.35■□□□□ 0.37
SMC4-209ENST00000468653 ZNF160Q9HCG1 818 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms