RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 RRP15Q9Y3B9 282 aaKnown RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 OR10H1Q9Y4A9 318 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 CLDN16Q9Y5I7 305 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 HEMK1Q9Y5R4 338 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 SNX13Q9Y5W8 968 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 WDFY4Q6ZS81 3184 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 CUL9Q8IWT3 2517 aa3.76□□□□□ -1.81
TMEM39A-204ENST00000468545 PTPRZ1P23471 2315 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 A0A087WV62 115 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 IGKV3D-11A0A0A0MRZ8 115 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 TRBV5-3A0A0A0MS03 114 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 NSG1A0A0A6YYJ2 146 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 NPIPA5A0A0B4J1W7 369 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 C2orf92A0A1B0GVN3 265 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 SAGE2PA6NJ88 616 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 A6NL46 340 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 DUXAA6NLW8 204 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 CDRT15L2A8MXV6 281 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 FAM220BPB1ANY3 271 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 NPIPA7E9PJI5 369 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 F5H697 171 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 PYCARD-AS1I3L0S3 204 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 M0QX08 132 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 WWP2O00308 870 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 HMGN4O00479 90 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 PEX12O00623 359 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 SOCS6O14544 535 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ARPC2O15144 300 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 NKX2-8O15522 239 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 PLOD3O60568 738 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 PRAMEF2O60811 474 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 COQ9O75208 318 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 REM1O75628 298 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 CREG1O75629 220 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ZFAND5O76080 213 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF682O95780 498 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 BAG2O95816 211 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 DDAH2O95865 285 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 SERPINA1P01009 418 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 OPN1SWP03999 348 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 CLPSP04118 112 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 BCHEP06276 602 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 NPIPA8P0DM63 369 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 PRKAR1AP10644 381 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 LIFP15018 202 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 HOXB9P17482 250 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 GPX2P18283 190 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 GGT1P19440 569 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 GATA3P23771 443 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 MMP11P24347 488 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 CD82P27701 267 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 HTR1EP28566 365 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 PPIFP30405 207 aaKnown RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 GALNSP34059 522 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 EMDP50402 254 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 GZMMP51124 257 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 CLCN2P51788 898 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF134P52741 427 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 MVDP53602 400 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC26A5P58743 744 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 RPS16P62249 146 aaKnown RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 CDK6Q00534 326 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 DMTNQ08495 405 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 FUT7Q11130 342 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 FLOT2Q14254 428 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 KPNB1Q14974 876 aaKnown RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 GPR68Q15743 365 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 DUSP5Q16690 384 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 LRRC23Q53EV4 343 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ATP1A1-AS1Q5TC04 95 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 FHL5Q5TD97 284 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 FCRLBQ6BAA4 426 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 SFRP4Q6FHJ7 346 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 MFSD12Q6NUT3 480 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 CDC73Q6P1J9 531 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ERICH5Q6P6B1 374 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 TMEM205Q6UW68 189 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 KIRREL2Q6UWL6 708 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 TMEM108Q6UXF1 575 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 C16orf47Q6ZP98 133 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 USP51Q70EK9 711 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 NDUFAF7Q7L592 441 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC29A4Q7RTT9 530 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 NET1Q7Z628 596 aaPredicted RBP3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 SERPINA11Q86U17 422 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 CALHM3Q86XJ0 350 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 PTOV1Q86YD1 416 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 RAB43Q86YS6 212 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 OR2L13Q8N349 312 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF614Q8N883 585 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF615Q8N8J6 731 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 COX18Q8N8Q8 333 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 CDRT4Q8N9R6 151 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC16A11Q8NCK7 471 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 C11orf65Q8NCR3 313 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 MORN4Q8NDC4 146 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 C7orf57Q8NEG2 295 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 B3GNT7Q8NFL0 401 aa3.75□□□□□ -1.81
TMEM39A-204ENST00000468545 TNIP2Q8NFZ5 429 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms