RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 C9JVG2 144 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 E7EQL1 145 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 CYTIPO60759 359 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 PGM3O95394 542 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 NUDT14O95848 222 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 HMGN2P05204 90 aaKnown RBP11.55□□□□□ -0.56
PTPN7-207ENST00000468385 MYL2P10916 166 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 EFNA1P20827 205 aaPredicted RBP11.55□□□□□ -0.56
PTPN7-207ENST00000468385 SUMO3P55854 103 aaPredicted RBP11.55□□□□□ -0.56
PTPN7-207ENST00000468385 NAA20P61599 178 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 VLDLRP98155 873 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 SELENBP1Q13228 472 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 LASP1Q14847 261 aaKnown RBP11.55□□□□□ -0.56
PTPN7-207ENST00000468385 NDUFAF6Q330K2 333 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 ELOA3BQ3SY89 546 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 KLHL26Q53HC5 615 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 CLEC6AQ6EIG7 209 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 LRIG3Q6UXM1 1119 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 NOA1Q8NC60 698 aaKnown RBP11.55□□□□□ -0.56
PTPN7-207ENST00000468385 ELOA3Q8NG57 546 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 OR2T11Q8NH01 316 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 CLHC1Q8NHS4 586 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 JADE3Q92613 823 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 ZNF75CPQ92670 426 aaPredicted RBP11.55□□□□□ -0.56
PTPN7-207ENST00000468385 ZNF775Q96BV0 537 aaPredicted RBP11.55□□□□□ -0.56
PTPN7-207ENST00000468385 MUCL1Q96DR8 90 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 CCDC126Q96EE4 140 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 MRGPRX4Q96LA9 322 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 ADAD1Q96M93 576 aaKnown RBP11.55□□□□□ -0.56
PTPN7-207ENST00000468385 ZNF300Q96RE9 604 aaPredicted RBP11.55□□□□□ -0.56
PTPN7-207ENST00000468385 CCT7Q99832 543 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 PIGUQ9H490 435 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 ANKZF1Q9H8Y5 726 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 BAIAP2L1Q9UHR4 511 aa11.55□□□□□ -0.56
PTPN7-207ENST00000468385 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.55□□□□□ -0.56
PTPN7-207ENST00000468385 ETV2O00321 342 aaPredicted RBP11.54□□□□□ -0.56
PTPN7-207ENST00000468385 SLC28A1O00337 649 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 SMAD9O15198 467 aaKnown RBP11.54□□□□□ -0.56
PTPN7-207ENST00000468385 C8BP07358 591 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 GGT1P19440 569 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 TTKP33981 857 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 DSCR9P59020 149 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 DNAJB13P59910 316 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 SPOCK1Q08629 439 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 RASGEF1BQ0VAM2 473 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 MLC1Q15049 377 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 RFTN2Q52LD8 501 aaPredicted RBP11.54□□□□□ -0.56
PTPN7-207ENST00000468385 SLC25A53Q5H9E4 307 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 CDC73Q6P1J9 531 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 CLEC2AQ6UVW9 174 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 SSX8Q7RTT4 187 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 P2RY8Q86VZ1 359 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 ZNF527Q8NB42 609 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 OR2W6PQ8NHA6 318 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 HTRA1Q92743 480 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 RADILQ96JH8 1075 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 KCNK17Q96T54 332 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 DHRS9Q9BPW9 319 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 HOXD1Q9GZZ0 328 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 CBLN4Q9NTU7 201 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 ZCCHC3Q9NUD5 404 aaKnown RBP11.54□□□□□ -0.56
PTPN7-207ENST00000468385 DCDC2Q9UHG0 476 aa11.54□□□□□ -0.56
PTPN7-207ENST00000468385 ALPK2Q86TB3 2170 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 OR5H1A6NKK0 313 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 ZNF724A8MTY0 619 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 NPIPB9F8W1W9 429 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 RIPK2O43353 540 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 H6PDO95479 791 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 PROCP04070 461 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 SLC25A16P16260 332 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 ATP6V1C1P21283 382 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 SLC7A1P30825 629 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 ATP12AP54707 1039 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 CASP9P55211 416 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 RPL38P63173 70 aaKnown RBP11.53□□□□□ -0.56
PTPN7-207ENST00000468385 ARL13AQ5H913 290 aaPredicted RBP11.53□□□□□ -0.56
PTPN7-207ENST00000468385 DCST2Q5T1A1 773 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 B3GLCTQ6Y288 498 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 RNF165Q6ZSG1 346 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 ZNF525Q8N782 197 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 ZNF433Q8N7K0 673 aaPredicted RBP11.53□□□□□ -0.56
PTPN7-207ENST00000468385 MTERF3Q96E29 417 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 CHMP6Q96FZ7 201 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 BEX2Q9BXY8 128 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 TUBB1Q9H4B7 451 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 PSMC3IPQ9P2W1 217 aaPredicted RBP11.53□□□□□ -0.56
PTPN7-207ENST00000468385 KCNE3Q9Y6H6 103 aa11.53□□□□□ -0.56
PTPN7-207ENST00000468385 YLPM1P49750 1951 aaKnown RBP11.52□□□□□ -0.56
PTPN7-207ENST00000468385 A0A1W2PPM1 405 aa11.52□□□□□ -0.57
PTPN7-207ENST00000468385 H3BNH8 94 aa11.52□□□□□ -0.57
PTPN7-207ENST00000468385 GTPBP1O00178 669 aaKnown RBP11.52□□□□□ -0.57
PTPN7-207ENST00000468385 LSM1O15116 133 aaKnown RBP11.52□□□□□ -0.57
PTPN7-207ENST00000468385 ZNF500O60304 480 aaPredicted RBP11.52□□□□□ -0.57
PTPN7-207ENST00000468385 GLRA3O75311 464 aa11.52□□□□□ -0.57
PTPN7-207ENST00000468385 RAD51DO75771 328 aa11.52□□□□□ -0.57
PTPN7-207ENST00000468385 IGHV4-31P0DP07 118 aa11.52□□□□□ -0.57
PTPN7-207ENST00000468385 ZNF16P17020 682 aaPredicted RBP11.52□□□□□ -0.57
PTPN7-207ENST00000468385 QPRTQ15274 297 aa11.52□□□□□ -0.57
PTPN7-207ENST00000468385 RAB35Q15286 201 aa11.52□□□□□ -0.57
PTPN7-207ENST00000468385 WHAMMP3Q1A5X7 153 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms