RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ZBTB8AQ96BR9 441 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 ARSGQ96EG1 525 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 CHMP6Q96FZ7 201 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 ADGRG7Q96K78 797 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 MAGEB18Q96M61 343 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 PANX1Q96RD7 426 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 ZNF587Q96SQ5 575 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-205ENST00000468338 ZBTB18Q99592 522 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 NPAS1Q99742 590 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 SLC35A5Q9BS91 424 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 INPP5KQ9BT40 448 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 CCDC28BQ9BUN5 200 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 POLE3Q9NRF9 147 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 INTS9Q9NV88 658 aaKnown RBP10.04□□□□□ -0.8
COL4A6-205ENST00000468338 EXD2Q9NVH0 621 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 DTNAQ9Y4J8 743 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 FBN2P35556 2912 aa10.04□□□□□ -0.8
COL4A6-205ENST00000468338 H0YC42 278 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 HMGN4O00479 90 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 ADAMDEC1O15204 470 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 OIP5O43482 229 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 DIAPH2O60879 1101 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 UGT2B17O75795 530 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 NTN1O95631 604 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 TGM6O95932 706 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 SNRPB2P08579 225 aaKnown RBP10.03□□□□□ -0.8
COL4A6-205ENST00000468338 OR12D1P0DN82 309 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 POU3F2P20265 443 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-205ENST00000468338 BMP5P22003 454 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 TCEA1P23193 301 aaKnown RBP10.03□□□□□ -0.8
COL4A6-205ENST00000468338 OPRM1P35372 400 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 ASCL1P50553 236 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 P2RX1P51575 399 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 MVDP53602 400 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 GYS2P54840 703 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 TPD52P55327 224 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-205ENST00000468338 CLDN20P56880 219 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 EEFSECP57772 596 aaKnown RBP10.03□□□□□ -0.8
COL4A6-205ENST00000468338 RAC1P63000 192 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 FOXF2Q12947 444 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 TYW3Q6IPR3 259 aaKnown RBP10.03□□□□□ -0.8
COL4A6-205ENST00000468338 TNFAIP8L2Q6P589 184 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-205ENST00000468338 TRIML2Q8N7C3 387 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 FAM71CQ8NEG0 241 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 TOR1AIP2Q8NFQ8 470 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 OR9I1Q8NGQ6 314 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 PHOSPHO1Q8TCT1 267 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 ZFP90Q8TF47 636 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 XAGE5Q8WWM1 108 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 RAB8BQ92930 207 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 ZNF524Q96C55 264 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 MARK4Q96L34 752 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 EBF4Q9BQW3 602 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 SFXN3Q9BWM7 321 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 SLC52A3Q9NQ40 469 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 TCF7L2Q9NQB0 619 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 SLC6A13Q9NSD5 602 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 TMEM45AQ9NWC5 275 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 VDAC3Q9Y277 283 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 ZNF175Q9Y473 711 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 DCHS2Q6V1P9 2916 aa10.03□□□□□ -0.8
COL4A6-205ENST00000468338 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 CENPVL1A0A0U1RR11 272 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 FAM234BA2RU67 622 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 SERINC4A6NH21 518 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 SHISA8B8ZZ34 492 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 H3BML4 177 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 H3BNH8 94 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 EFNA2O43921 213 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 KIAA0513O60268 411 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 EIF4E2O60573 245 aaKnown RBP10.02□□□□□ -0.81
COL4A6-205ENST00000468338 TNFSF13O75888 250 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 CRHP06850 196 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 TMIGD3P0DMS9 266 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-205ENST00000468338 NID1P14543 1247 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 SSTR2P30874 369 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 EIF1P41567 113 aaKnown RBP10.02□□□□□ -0.81
COL4A6-205ENST00000468338 PCYT1AP49585 367 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 KHKP50053 298 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 POLR2JP52435 117 aaKnown RBP10.02□□□□□ -0.81
COL4A6-205ENST00000468338 CASP9P55211 416 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 EEF1A1P68104 462 aaKnown RBP10.02□□□□□ -0.81
COL4A6-205ENST00000468338 GUSBP1Q15486 140 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 GPR68Q15743 365 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 MAPK14Q16539 360 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 CTU2Q2VPK5 515 aaKnown RBP10.02□□□□□ -0.81
COL4A6-205ENST00000468338 SLC25A53Q5H9E4 307 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 PDZK1Q5T2W1 519 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 EEF1A1P5Q5VTE0 462 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 PLXDC2Q6UX71 529 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 FRRS1Q6ZNA5 592 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 ZNF621Q6ZSS3 439 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 SPATC1Q76KD6 591 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 OLIG3Q7RTU3 272 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 C16orf62Q7Z3J2 963 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 RNF130Q86XS8 419 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 FUNDC1Q8IVP5 155 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 MIER2Q8N344 545 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 GPR119Q8TDV5 335 aa10.02□□□□□ -0.81
COL4A6-205ENST00000468338 RNASE6Q93091 150 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms