RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 Q6ZPB1 254 aaPredicted RBP9.37□□□□□ -0.91
MSH5-213ENST00000468136 CPEB2Q7Z5Q1 589 aaKnown RBP9.37□□□□□ -0.91
MSH5-213ENST00000468136 HMGN2P46Q86SG4 172 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 DND1Q8IYX4 353 aaKnown RBP9.37□□□□□ -0.91
MSH5-213ENST00000468136 TCEANCQ8N8B7 351 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 BMPERQ8N8U9 685 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 PROKR2Q8NFJ6 384 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 OR4C3Q8NH37 302 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 RHBDD1Q8TEB9 315 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 DOK4Q8TEW6 326 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 TMEM255BQ8WV15 326 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 LIPHQ8WWY8 451 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 NACC2Q96BF6 587 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 C12orf43Q96C57 262 aaKnown RBP9.37□□□□□ -0.91
MSH5-213ENST00000468136 NMD3Q96D46 503 aaKnown RBP9.37□□□□□ -0.91
MSH5-213ENST00000468136 TMCO6Q96DC7 493 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 BPIFA2Q96DR5 249 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 NECAB3Q96P71 396 aaPredicted RBP9.37□□□□□ -0.91
MSH5-213ENST00000468136 ARRDC1-AS1Q9H2J1 176 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 ISYNA1Q9NPH2 558 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 CTPS2Q9NRF8 586 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 RXFP3Q9NSD7 469 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 H2AFY2Q9P0M6 372 aaPredicted RBP9.37□□□□□ -0.91
MSH5-213ENST00000468136 CTSFQ9UBX1 484 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 ENPP5Q9UJA9 477 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 PCDHGA1Q9Y5H4 931 aa9.37□□□□□ -0.91
MSH5-213ENST00000468136 ZDBF2Q9HCK1 2354 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 LOC102723996A0A087X1L8 192 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 NPIPA5A0A0B4J1W7 369 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 CENPVL1A0A0U1RR11 272 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 A8MUA0 341 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 KDM4EB2RXH2 506 aaPredicted RBP9.36□□□□□ -0.91
MSH5-213ENST00000468136 NPIPA7E9PJI5 369 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 GALR2O43603 387 aaPredicted RBP9.36□□□□□ -0.91
MSH5-213ENST00000468136 TLX2O43763 284 aaPredicted RBP9.36□□□□□ -0.91
MSH5-213ENST00000468136 CDC40O60508 579 aaKnown RBP eCLIP9.36□□□□□ -0.91
MSH5-213ENST00000468136 ENTPD6O75354 484 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 ZFAND5O76080 213 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 GABARAPO95166 117 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 FADS2O95864 444 aaKnown RBP9.36□□□□□ -0.91
MSH5-213ENST00000468136 NPIPA8P0DM63 369 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 PRG2P13727 222 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 PGCP20142 388 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 NR0B1P51843 470 aaKnown RBP9.36□□□□□ -0.91
MSH5-213ENST00000468136 PRPS1P60891 318 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 RNF4P78317 190 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 ROR2Q01974 943 aaKnown RBP9.36□□□□□ -0.91
MSH5-213ENST00000468136 EXT1Q16394 746 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 SMN1Q16637 294 aaKnown RBP9.36□□□□□ -0.91
MSH5-213ENST00000468136 C3orf38Q5JPI3 329 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 PRAMEF17Q5VTA0 474 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 NXNL2Q5VZ03 156 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 TMEM236Q5W0B7 351 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 SMARCD3Q6STE5 483 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 GDPGP1Q6ZNW5 385 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 ZAR1Q86SH2 424 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 KIF18BQ86Y91 864 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 C9orf40Q8IXQ3 194 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 LNX2Q8N448 690 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 NFAM1Q8NET5 270 aaPredicted RBP9.36□□□□□ -0.91
MSH5-213ENST00000468136 FANK1Q8TC84 345 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 PHOSPHO1Q8TCT1 267 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 UBE2FQ969M7 185 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 OMA1Q96E52 524 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 ARSGQ96EG1 525 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 SGTBQ96EQ0 304 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 LRR1Q96L50 414 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 COG8Q96MW5 612 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 GAL3ST4Q96RP7 486 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 IL4I1Q96RQ9 567 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 GPA33Q99795 319 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 CRB3Q9BUF7 120 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 MND1Q9BWT6 205 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 TBL1XR1Q9BZK7 514 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 B3GNT4Q9C0J1 378 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 FGF20Q9NP95 211 aaPredicted RBP9.36□□□□□ -0.91
MSH5-213ENST00000468136 FSCN3Q9NQT6 498 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 SDHAF3Q9NRP4 125 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 CNIH4Q9P003 139 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 DIMT1Q9UNQ2 313 aaKnown RBP9.36□□□□□ -0.91
MSH5-213ENST00000468136 SLC6A5Q9Y345 797 aa9.36□□□□□ -0.91
MSH5-213ENST00000468136 EXOSC1Q9Y3B2 195 aaKnown RBP9.36□□□□□ -0.91
MSH5-213ENST00000468136 ADAMTS20P59510 1910 aa9.35□□□□□ -0.91
MSH5-213ENST00000468136 A0A1W2PQ72 361 aa9.35□□□□□ -0.91
MSH5-213ENST00000468136 ELOA3DA6NLF2 546 aaPredicted RBP9.35□□□□□ -0.91
MSH5-213ENST00000468136 H3BMQ9 156 aa9.35□□□□□ -0.91
MSH5-213ENST00000468136 SURF4O15260 269 aa9.35□□□□□ -0.91
MSH5-213ENST00000468136 NDUFB5O43674 189 aa9.35□□□□□ -0.91
MSH5-213ENST00000468136 LRP3O75074 770 aa9.35□□□□□ -0.91
MSH5-213ENST00000468136 PTP4A3O75365 173 aa9.35□□□□□ -0.91
MSH5-213ENST00000468136 NDUFB2O95178 105 aa9.35□□□□□ -0.91
MSH5-213ENST00000468136 RAB36O95755 333 aa9.35□□□□□ -0.91
MSH5-213ENST00000468136 ZNF806P0C7X5 589 aa9.35□□□□□ -0.91
MSH5-213ENST00000468136 SAGP10523 405 aaPredicted RBP9.35□□□□□ -0.91
MSH5-213ENST00000468136 DBTP11182 482 aaKnown RBP9.35□□□□□ -0.91
MSH5-213ENST00000468136 APEHP13798 732 aaKnown RBP9.35□□□□□ -0.91
MSH5-213ENST00000468136 MYL12AP19105 171 aa9.35□□□□□ -0.91
MSH5-213ENST00000468136 FUT4P22083 530 aa9.35□□□□□ -0.91
MSH5-213ENST00000468136 PAICSP22234 425 aaKnown RBP9.35□□□□□ -0.91
MSH5-213ENST00000468136 PSMB9P28065 219 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms