RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 HPGDP15428 266 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 PSMA4P25789 261 aaKnown RBP6.29□□□□□ -1.4
SCAF4-204ENST00000467731 SELENOWP63302 87 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF141Q15928 474 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 MTX3Q5HYI7 312 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 BICRALQ6AI39 1079 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF836Q6ZNA1 936 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 COMTD1Q86VU5 262 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 ERI1Q8IV48 349 aaKnown RBP6.29□□□□□ -1.4
SCAF4-204ENST00000467731 GPR32P1Q8NGA4 272 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 GRHL3Q8TE85 626 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 CHPT1Q8WUD6 406 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 APOBEC4Q8WW27 367 aaKnown RBP6.29□□□□□ -1.4
SCAF4-204ENST00000467731 RASSF5Q8WWW0 418 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 HGDQ93099 445 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 HSH2DQ96JZ2 352 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 NODALQ96S42 347 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 TRIM15Q9C019 465 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 GRIP2Q9C0E4 1043 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 ARMC7Q9H6L4 198 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 NTN4Q9HB63 628 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 MOV10Q9HCE1 1003 aaKnown RBP6.29□□□□□ -1.4
SCAF4-204ENST00000467731 ADPRHL2Q9NX46 363 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 RPS6KA6Q9UK32 745 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 SAMD4AQ9UPU9 718 aaKnown RBP6.29□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF443Q9Y2A4 671 aaPredicted RBP6.29□□□□□ -1.4
SCAF4-204ENST00000467731 CHST2Q9Y4C5 530 aa6.29□□□□□ -1.4
SCAF4-204ENST00000467731 CHCHD2Q9Y6H1 151 aaPredicted RBP6.29□□□□□ -1.4
SCAF4-204ENST00000467731 TCRBV3S1A0A5B6 114 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 CCDC160A6NGH7 325 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 AQP12BA6NM10 295 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 SCDO00767 359 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 PRKD3O94806 890 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 WDPCPO95876 746 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 EPPINO95925 133 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 IFNA14P01570 189 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 DBIP07108 87 aaKnown RBP6.28□□□□□ -1.4
SCAF4-204ENST00000467731 PRKCAP17252 672 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 TNFRSF1BP20333 461 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 CD247P20963 164 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 TBXA2RP21731 343 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 LCN1P31025 176 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 KCNJ5P48544 419 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 CYB561P49447 251 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 UCNP55089 124 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 RHDQ02161 417 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 OC90Q02509 493 aaPredicted RBP6.28□□□□□ -1.4
SCAF4-204ENST00000467731 PLAURQ03405 335 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 EFR3AQ14156 821 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 LARS2Q15031 903 aaKnown RBP6.28□□□□□ -1.4
SCAF4-204ENST00000467731 Q3ZCU0 254 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 MRPL2Q5T653 305 aaKnown RBP6.28□□□□□ -1.4
SCAF4-204ENST00000467731 BORAQ6PGQ7 559 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 ISLR2Q6UXK2 745 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 EIF3MQ7L2H7 374 aaKnown RBP6.28□□□□□ -1.4
SCAF4-204ENST00000467731 MDGA2Q7Z553 956 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 AQP12AQ8IXF9 295 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 EID3Q8N140 333 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 CYP4Z2PQ8N1L4 340 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 CENPSQ8N2Z9 138 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 GATSQ8NAP1 163 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF527Q8NB42 609 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 CANT1Q8WVQ1 401 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 TTC9Q92623 222 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 TMCO6Q96DC7 493 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 SEPHS2Q99611 448 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 TUBA1CQ9BQE3 449 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 WFDC6Q9BQY6 131 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 RTN4RQ9BZR6 473 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 CACYBPQ9HB71 228 aaKnown RBP6.28□□□□□ -1.4
SCAF4-204ENST00000467731 OLAHQ9NV23 265 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 DTNAQ9Y4J8 743 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 MPDZO75970 2070 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 TLN1Q9Y490 2541 aaKnown RBP6.28□□□□□ -1.4
SCAF4-204ENST00000467731 DHRS12A0PJE2 317 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 OR6C65A6NJZ3 312 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 C17orf51A8MQB3 221 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 ALG1L2C9J202 215 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 CLOCKO15516 846 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 BCAS1O75363 584 aaPredicted RBP6.28□□□□□ -1.4
SCAF4-204ENST00000467731 THBS1P07996 1170 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 CCL3P10147 92 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 OR1E2P47887 323 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 GPR85P60893 370 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 EEF1A1P68104 462 aaKnown RBP6.28□□□□□ -1.4
SCAF4-204ENST00000467731 CXADRP78310 365 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 KCNJ10P78508 379 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 ELOAQ14241 798 aaKnown RBP6.28□□□□□ -1.4
SCAF4-204ENST00000467731 FGFBP1Q14512 234 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 CD226Q15762 336 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 RGS21Q2M5E4 152 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 KLHL26Q53HC5 615 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 PRAMEF20Q5VT98 475 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 SPINK14Q6IE38 97 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 FKBP9P1Q75LS8 142 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 NUP54Q7Z3B4 507 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 CCDC28AQ8IWP9 274 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 DND1Q8IYX4 353 aaKnown RBP6.28□□□□□ -1.4
SCAF4-204ENST00000467731 CLIP4Q8N3C7 705 aa6.28□□□□□ -1.4
SCAF4-204ENST00000467731 POGLUT1Q8NBL1 392 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms