RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	ENPP4	Q9Y6X5	453 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	NOTCH2	Q04721	2471 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	NBPF19	A0A087WUL8	3843 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663		A0A1W2PQD3	144 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	GXYLT2	A0PJZ3	443 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	PINLYP	A6NC86	204 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	OR6C70	A6NIJ9	312 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	TMEM229A	B2RXF0	380 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	PRSS44	E7EML9	344 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	NPIPB9	F8W1W9	429 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663		H3BNH8	94 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	FCMR	O60667	390 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	FMO6P	O60774	539 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	OPN1SW	P03999	348 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	CNR1	P21554	472 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	IL12B	P29460	328 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	RFC3	P40938	356 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	HSPA13	P48723	471 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	TRIP10	Q15642	601 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	GPR68	Q15743	365 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	NRF1	Q16656	503 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	WDR53	Q7Z5U6	358 aa	Predicted RBP	11	□□□□□ -0.65
CTNS-205	ENST00000467663	VTCN1	Q7Z7D3	282 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	ZDHHC13	Q8IUH4	622 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	LILRA2	Q8N149	483 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	LINC00471	Q8N535	108 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	FAM86B1	Q8N7N1	296 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	OR2M7	Q8NG81	312 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	OR5K1	Q8NHB7	308 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	PHF10	Q8WUB8	498 aa	Known RBP	11	□□□□□ -0.65
CTNS-205	ENST00000467663	OTUB1	Q96FW1	271 aa	Predicted RBP	11	□□□□□ -0.65
CTNS-205	ENST00000467663	SGCZ	Q96LD1	299 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	EPYC	Q99645	322 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	ARHGDIG	Q99819	225 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	KLHL4	Q9C0H6	718 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	ANKRD19P	Q9H560	264 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	REEP1	Q9H902	201 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	MKLN1	Q9UL63	735 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	ZNF443	Q9Y2A4	671 aa	Predicted RBP	11	□□□□□ -0.65
CTNS-205	ENST00000467663	DTX4	Q9Y2E6	619 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	SH3GLB1	Q9Y371	365 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663		V9GYQ6	96 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663	MYO7B	Q6PIF6	2116 aa		11	□□□□□ -0.65
CTNS-205	ENST00000467663		A0A1B0GTH9	108 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663		E9PLN8	166 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	AP3D1	O14617	1153 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	PRRG2	O14669	202 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	ADAM10	O14672	748 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	ZNHIT1	O43257	154 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	TPST1	O60507	370 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	TSPAN2	O60636	221 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	UGT2B17	O75795	530 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	GLS	O94925	669 aa	Predicted RBP	10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	NADK	O95544	446 aa	Predicted RBP	10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	THRB	P10828	461 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	HPGD	P15428	266 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	FPR1	P21462	350 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	TBXA2R	P21731	343 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	DNAJA1	P31689	397 aa	Known RBP	10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	PTGS2	P35354	604 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	CLK3	P49761	638 aa	Known RBP	10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	NR0B1	P51843	470 aa	Known RBP	10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	SMS	P52788	366 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	HMGA2	P52926	109 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	SESN3	P58005	492 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	EEF1A1	P68104	462 aa	Known RBP	10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	RPP38	P78345	283 aa	Known RBP	10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	VLDLR	P98155	873 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	FGFBP1	Q14512	234 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	ZNF791	Q3KP31	576 aa	Predicted RBP	10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	IQCC	Q4KMZ1	466 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	CCNJ	Q5T5M9	372 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	PPP4R4	Q6NUP7	873 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	FIGNL1	Q6PIW4	674 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	LYPD8	Q6UX82	237 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	ZBTB49	Q6ZSB9	765 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	ZNF550	Q7Z398	422 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	NUP54	Q7Z3B4	507 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	GALNT10	Q86SR1	603 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	RANBP3L	Q86VV4	465 aa	Predicted RBP	10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	CARM1	Q86X55	608 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	MISP	Q8IVT2	679 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	SMYD1	Q8NB12	490 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	PIK3C3	Q8NEB9	887 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	GPR32P1	Q8NGA4	272 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	FAM57A	Q8TBR7	257 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	DOK4	Q8TEW6	326 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	RDH12	Q96NR8	316 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	GAL3ST4	Q96RP7	486 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	DMRTA2	Q96SC8	542 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	PIP5K1A	Q99755	562 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	VKORC1	Q9BQB6	163 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	FAM173A	Q9BQD7	235 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	ZDHHC11	Q9H8X9	412 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	SH2D2A	Q9NP31	389 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	SACM1L	Q9NTJ5	587 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	NDUFAF4	Q9P032	175 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	TES	Q9UGI8	421 aa	Known RBP	10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	ACAD8	Q9UKU7	415 aa		10.99	□□□□□ -0.65
CTNS-205	ENST00000467663	DTNA	Q9Y4J8	743 aa		10.99	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms