RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 CDV3Q9UKY7 258 aaKnown RBP17.15■□□□□ 0.34
CAPN3-209ENST00000466222 PEX16Q9Y5Y5 336 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 PCDH17O14917 1159 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 S100A5P33763 92 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 RGS6P49758 472 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 PTGES3Q15185 160 aaKnown RBP17.15■□□□□ 0.34
CAPN3-209ENST00000466222 GPR68Q15743 365 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 RSPO4Q2I0M5 234 aaPredicted RBP17.15■□□□□ 0.34
CAPN3-209ENST00000466222 ARMCX4Q5H9R4 360 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 TYW3Q6IPR3 259 aaKnown RBP17.15■□□□□ 0.34
CAPN3-209ENST00000466222 LSRQ86X29 649 aaPredicted RBP17.15■□□□□ 0.34
CAPN3-209ENST00000466222 VRK2Q86Y07 508 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 OR7G1Q8NGA0 311 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 THAP3Q8WTV1 239 aaPredicted RBP17.15■□□□□ 0.34
CAPN3-209ENST00000466222 RASSF5Q8WWW0 418 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 STACQ99469 402 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 NXF5Q9H1B4 397 aaKnown RBP17.15■□□□□ 0.34
CAPN3-209ENST00000466222 KCNE5Q9UJ90 142 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 NXT1Q9UKK6 140 aaKnown RBP17.15■□□□□ 0.34
CAPN3-209ENST00000466222 LIPT1Q9Y234 373 aa17.15■□□□□ 0.34
CAPN3-209ENST00000466222 GPC6Q9Y625 555 aaPredicted RBP17.15■□□□□ 0.34
CAPN3-209ENST00000466222 PEX12O00623 359 aa17.14■□□□□ 0.33
CAPN3-209ENST00000466222 EPPINO95925 133 aa17.14■□□□□ 0.33
CAPN3-209ENST00000466222 MAGEA8P43361 318 aa17.14■□□□□ 0.33
CAPN3-209ENST00000466222 POU6F2P78424 691 aaPredicted RBP17.14■□□□□ 0.33
CAPN3-209ENST00000466222 KRR1Q13601 381 aaKnown RBP17.14■□□□□ 0.33
CAPN3-209ENST00000466222 ZNHIT3Q15649 155 aaPredicted RBP17.14■□□□□ 0.33
CAPN3-209ENST00000466222 MAPK14Q16539 360 aa17.14■□□□□ 0.33
CAPN3-209ENST00000466222 DESI1Q6ICB0 168 aa17.14■□□□□ 0.33
CAPN3-209ENST00000466222 AQP11Q8NBQ7 271 aa17.14■□□□□ 0.33
CAPN3-209ENST00000466222 BCL2L10Q9HD36 194 aa17.14■□□□□ 0.33
CAPN3-209ENST00000466222 TCFL5Q9UL49 500 aa17.14■□□□□ 0.33
CAPN3-209ENST00000466222 TMCC3Q9ULS5 477 aa17.14■□□□□ 0.33
CAPN3-209ENST00000466222 MGAT4BQ9UQ53 548 aa17.14■□□□□ 0.33
CAPN3-209ENST00000466222 GPR55Q9Y2T6 319 aaPredicted RBP17.14■□□□□ 0.33
CAPN3-209ENST00000466222 WDR45Q9Y484 360 aa17.14■□□□□ 0.33
CAPN3-209ENST00000466222 HS3ST3B1Q9Y662 390 aa17.14■□□□□ 0.33
CAPN3-209ENST00000466222 MRPS18BQ9Y676 258 aaKnown RBP17.14■□□□□ 0.33
CAPN3-209ENST00000466222 DSPPQ9NZW4 1301 aa17.14■□□□□ 0.33
CAPN3-209ENST00000466222 J3KTA2 159 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 CELA2AP08217 269 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 SMIM11AP58511 58 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 PUM1Q14671 1186 aaKnown RBP eCLIP17.13■□□□□ 0.33
CAPN3-209ENST00000466222 EBPQ15125 230 aaKnown RBP17.13■□□□□ 0.33
CAPN3-209ENST00000466222 TGIF1Q15583 401 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 ZNF770Q6IQ21 691 aaPredicted RBP17.13■□□□□ 0.33
CAPN3-209ENST00000466222 C19orf48Q6RUI8 117 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 PRR22Q8IZ63 422 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 MORN4Q8NDC4 146 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 B3GNT7Q8NFL0 401 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 ADIPOR1Q96A54 375 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 Q96MT0 163 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 ZNF350Q9GZX5 532 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 NMNAT1Q9HAN9 279 aaPredicted RBP17.13■□□□□ 0.33
CAPN3-209ENST00000466222 COPS7AQ9UBW8 275 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 SEC14L3Q9UDX4 400 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 ITGB1BP2Q9UKP3 347 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 FARSAQ9Y285 508 aaKnown RBP17.13■□□□□ 0.33
CAPN3-209ENST00000466222 IFT52Q9Y366 437 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 CHST2Q9Y4C5 530 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 KNTC1P50748 2209 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 A0A0G2JPF8 293 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 LOC101059948A0A1B0GTJ6 334 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 PNMA8CA0A1B0GUJ8 204 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 C2orf92A0A1B0GVN3 265 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 HNRNPCL2B2RXH8 293 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 HNRNPCL3B7ZW38 293 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 BRINP1O60477 761 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 ATP6V1G1O75348 118 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 AGR2O95994 175 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 PTHP01270 115 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 HNRNPCL4P0DMR1 293 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 FUT4P22083 530 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 SOX6P35712 828 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 FOLR3P41439 243 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 NUDT6P53370 316 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 SNRPGP62308 76 aaKnown RBP17.13■□□□□ 0.33
CAPN3-209ENST00000466222 MEDAGQ5VYS4 303 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 KLHL17Q6TDP4 642 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 KIRREL2Q6UWL6 708 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 TMPRSS7Q7RTY8 843 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 SLC22A16Q86VW1 577 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 RBM45Q8IUH3 476 aaKnown RBP17.13■□□□□ 0.33
CAPN3-209ENST00000466222 LYSMD2Q8IV50 215 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 NLGN4XQ8N0W4 816 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 CADM3Q8N126 398 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 NLGN4YQ8NFZ3 816 aaPredicted RBP17.13■□□□□ 0.33
CAPN3-209ENST00000466222 OR4D11Q8NGI4 311 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 BBS10Q8TAM1 723 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 APOBEC4Q8WW27 367 aaKnown RBP17.13■□□□□ 0.33
CAPN3-209ENST00000466222 DHRS1Q96LJ7 313 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 ZNF607Q96SK3 696 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 LPAR4Q99677 370 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 AMBNQ9NP70 447 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 PRODH2Q9UF12 536 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 OR10H1Q9Y4A9 318 aa17.13■□□□□ 0.33
CAPN3-209ENST00000466222 FAAHO00519 579 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 RAD1O60671 282 aa17.12■□□□□ 0.33
CAPN3-209ENST00000466222 DBTP11182 482 aaKnown RBP17.12■□□□□ 0.33
CAPN3-209ENST00000466222 OSMP13725 252 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms