RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 CPA2P48052 419 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 IDH2P48735 452 aaKnown RBP10.51□□□□□ -0.73
CUX1-207ENST00000465461 GZMMP51124 257 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 SUMO3P55854 103 aaPredicted RBP10.51□□□□□ -0.73
CUX1-207ENST00000465461 SESN3P58005 492 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 EEF1A1P68104 462 aaKnown RBP10.51□□□□□ -0.73
CUX1-207ENST00000465461 CYP51A1Q16850 503 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 ZNF311Q5JNZ3 666 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 TMEM211Q6ICI0 200 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 GGNQ86UU5 652 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 COMTD1Q86VU5 262 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 LIX1LQ8IVB5 337 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 ZZZ3Q8IYH5 903 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 GTPBP8Q8N3Z3 284 aaPredicted RBP10.51□□□□□ -0.73
CUX1-207ENST00000465461 C9orf106Q8NAJ2 232 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 NAXEQ8NCW5 288 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 FAM71CQ8NEG0 241 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 RP9Q8TA86 221 aaKnown RBP10.51□□□□□ -0.73
CUX1-207ENST00000465461 ZNF563Q8TA94 476 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 BBS10Q8TAM1 723 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 PHF10Q8WUB8 498 aaKnown RBP10.51□□□□□ -0.73
CUX1-207ENST00000465461 RND1Q92730 232 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 ZBTB8AQ96BR9 441 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 DTNBP1Q96EV8 351 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 DNAJA3Q96EY1 480 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 KAT8Q9H7Z6 458 aaKnown RBP10.51□□□□□ -0.73
CUX1-207ENST00000465461 THUMPD1Q9NXG2 353 aaKnown RBP10.51□□□□□ -0.73
CUX1-207ENST00000465461 CALML5Q9NZT1 146 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 Q9UFV3 132 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 CORO2BQ9UQ03 480 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 SLC35A3Q9Y2D2 325 aa10.51□□□□□ -0.73
CUX1-207ENST00000465461 DOPEY2Q9Y3R5 2298 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 NCOA6Q14686 2063 aaPredicted RBP10.5□□□□□ -0.73
CUX1-207ENST00000465461 NKX2-6A6NCS4 301 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 CCT8L1PA6NM43 557 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 FAM90A27PA6NNH2 459 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 TNFSF11O14788 317 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 SLC22A2O15244 555 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 TPST1O60507 370 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 GCM2O75603 506 aaPredicted RBP10.5□□□□□ -0.73
CUX1-207ENST00000465461 TGM6O95932 706 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 OPN1SWP03999 348 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 PRG2P13727 222 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 ZNF17P17021 662 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 CCNA2P20248 432 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 SLC6A2P23975 617 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 GRNP28799 593 aaKnown RBP10.5□□□□□ -0.73
CUX1-207ENST00000465461 SFTPDP35247 375 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 SMSP52788 366 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 HOXC5Q00444 222 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 GNA13Q14344 377 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 BCL2A1Q16548 175 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 GLIPR1L2Q4G1C9 344 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 LIN52Q52LA3 116 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 COQ5Q5HYK3 327 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 NSUN5P2Q63ZY6 315 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 REEP3Q6NUK4 255 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 PPP4R4Q6NUP7 873 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 MTFR2Q6P444 385 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 EID3Q8N140 333 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 LILRA2Q8N149 483 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 ZNF808Q8N4W9 903 aaPredicted RBP10.5□□□□□ -0.73
CUX1-207ENST00000465461 MEIOBQ8N635 442 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 PCYOX1LQ8NBM8 494 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 ZPLD1Q8TCW7 415 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 FIG4Q92562 907 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 PINK1Q9BXM7 581 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 TMEM38AQ9H6F2 299 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 BCL2L10Q9HD36 194 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 MRGBPQ9NV56 204 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 ADAM21Q9UKJ8 722 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 ARL2BPQ9Y2Y0 163 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 AP4B1Q9Y6B7 739 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 ARHGAP21Q5T5U3 1957 aa10.5□□□□□ -0.73
CUX1-207ENST00000465461 PHF3Q92576 2039 aaKnown RBP10.5□□□□□ -0.73
CUX1-207ENST00000465461 A0A0J9YW62 118 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 C7orf72A4D263 438 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 CDHR4A6H8M9 788 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 CXCL13O43927 109 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 DNAJA2O60884 412 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 NTN1O95631 604 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 PGCP20142 388 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 EIF1AXP47813 144 aaKnown RBP10.49□□□□□ -0.73
CUX1-207ENST00000465461 RAC1P63000 192 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 MERTKQ12866 999 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 EPS8Q12929 822 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 FOXF2Q12947 444 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 CTU2Q2VPK5 515 aaKnown RBP10.49□□□□□ -0.73
CUX1-207ENST00000465461 TMEM176BQ3YBM2 270 aaPredicted RBP10.49□□□□□ -0.73
CUX1-207ENST00000465461 PLEKHM3Q6ZWE6 761 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 CHMP1BQ7LBR1 199 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 NET1Q7Z628 596 aaPredicted RBP10.49□□□□□ -0.73
CUX1-207ENST00000465461 SERPINA11Q86U17 422 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 CMIPQ8IY22 773 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 SMYD1Q8NB12 490 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 HIPK4Q8NE63 616 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 CA5BP1Q8WTZ4 195 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 ECSITQ9BQ95 431 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 WFDC6Q9BQY6 131 aa10.49□□□□□ -0.73
CUX1-207ENST00000465461 PRR14Q9BWN1 585 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 198.1 ms