RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 UGT2B17O75795 530 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 WDPCPO95876 746 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 F10P00742 488 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 LCN1P31025 176 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 CD96P40200 585 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 CYB561P49447 251 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 ATP12AP54707 1039 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 CDH12P55289 794 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 NUP107P57740 925 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 TUBA3CQ13748 450 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 EFR3AQ14156 821 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 CTU2Q2VPK5 515 aaKnown RBP15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 TUBA3EQ6PEY2 450 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 GPR141Q7Z602 305 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 ZNF227Q86WZ6 799 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 DND1Q8IYX4 353 aaKnown RBP15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 TTC9Q92623 222 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 CRELD1Q96HD1 420 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 HRASLS5Q96KN8 279 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 NODALQ96S42 347 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 RSPO3Q9BXY4 272 aaPredicted RBP15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 TRIM45Q9H8W5 580 aaPredicted RBP15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 VCX3AQ9NNX9 186 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 UBQLN4Q9NRR5 601 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 HPF1Q9NWY4 346 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 PTTG2Q9NZH5 202 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 ABI3Q9P2A4 366 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 SEC14L3Q9UDX4 400 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 PCDHGA10Q9Y5H3 936 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 GMPPBQ9Y5P6 360 aa15.5■□□□□ 0.07
EXOSC3-203ENST00000465229 AGAP5A6NIR3 686 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 AHCYL1O43865 530 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 GADD45GO95257 159 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 TBXA2RP21731 343 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 CDK5R2Q13319 367 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 ZNF141Q15928 474 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 EXOC3L2Q2M3D2 409 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 LAIR2Q6ISS4 152 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 IGFL2Q6UWQ7 119 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 APOOLQ6UXV4 268 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 EXTL1Q92935 676 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 SGCZQ96LD1 299 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 FEVQ99581 238 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 SMAD5Q99717 465 aaKnown RBP15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 HOXD1Q9GZZ0 328 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 ADNPQ9H2P0 1102 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 SH2D2AQ9NP31 389 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 PAPOLBQ9NRJ5 636 aaKnown RBP15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 ACAD8Q9UKU7 415 aa15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 PCDHGA9Q9Y5G4 932 aaKnown RBP15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 CHCHD2Q9Y6H1 151 aaPredicted RBP15.49■□□□□ 0.07
EXOSC3-203ENST00000465229 CDK2AP1O14519 115 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 FADS1O60427 444 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 ITGB2P05107 769 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 IL7RP16871 459 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 RPS4Y1P22090 263 aaKnown RBP15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 SMIM11AP58511 58 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 OC90Q02509 493 aaPredicted RBP15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 KLHL26Q53HC5 615 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 COLEC12Q5KU26 742 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 B3GNT6Q6ZMB0 384 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 MDGA2Q7Z553 956 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 GPALPP1Q8IXQ4 340 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 CYP4Z2PQ8N1L4 340 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 PARP8Q8N3A8 854 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 OR52P1PQ8NH57 321 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 PHF10Q8WUB8 498 aaKnown RBP15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 RNF138Q8WVD3 245 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 HAS2Q92819 552 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 TMCO6Q96DC7 493 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 UTP23Q9BRU9 249 aaKnown RBP15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 RNF32Q9H0A6 362 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 LRFN1Q9P244 771 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 NINQ8N4C6 2090 aa15.48■□□□□ 0.07
EXOSC3-203ENST00000465229 H3BSA7 217 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 SLC1A7O00341 560 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 TP53I11O14683 189 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 MRPS14O60783 128 aaKnown RBP15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 CCNB2O95067 398 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 OXSR1O95747 527 aaPredicted RBP15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 NGFRP08138 427 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 EEF1B2P24534 225 aaKnown RBP15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 IL5RAQ01344 420 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 PDZK1Q5T2W1 519 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 SPINK14Q6IE38 97 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 RTL4Q6ZR62 310 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 KCTD8Q6ZWB6 473 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 VRK2Q86Y07 508 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 PEX5LQ8IYB4 626 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 GRHL3Q8TE85 626 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 PAQR8Q8TEZ7 354 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 TMIGD2Q96BF3 282 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 PINK1Q9BXM7 581 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 PRORYQ9H606 182 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 ZNF556Q9HAH1 456 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 RSL24D1Q9UHA3 163 aaKnown RBP15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 BOD1L1Q8NFC6 3051 aa15.47■□□□□ 0.07
EXOSC3-203ENST00000465229 OR5H15A6NDH6 313 aa15.46■□□□□ 0.07
EXOSC3-203ENST00000465229 CLDN24A6NM45 220 aa15.46■□□□□ 0.07
EXOSC3-203ENST00000465229 J3KTA2 159 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms